| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5328 |
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| Symbol | pstC |
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| ID | 1042167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6074264 |
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| End bp | 6076273 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148727 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | NP_747429 |
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| Protein GI | 26992004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.662544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00483454 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGCGC TTGAAGAGCA GAATCAGGTG GGGATGCGTG TTTCGGACAA GGGCCAGGCA
TTGTTCTTCG ATACCAAGAC CGGTAACGAA CTCAAGCGTG TCGAACTACC CGTGCCGGCA
GACACCCAGG TCACGTCCAT CAGTACTGAC CAGCCGGGCA GCGCGCTGGT GGTGCTGGGC
CTGTCCAATG GCCAGGCGCT GGTTTTCCAG CACACCTACA AGATCACCTA CCCGGACAAC
AAGAAAACCA TCAGCCCTGG CATCGACTAC CCGTACGGCG AGCAATCGTT CGTGCTCGAC
GAGCAGGGGC GTGCGCTGGA CCACGTCAGC GTCAACGTCA ATGGCGACAC CCTGCTGCTT
GCCGGCTCTA CCGGTGCTCA TCTGCAGGTG GTCGAGCTGA CCCGCACGGA AAACATGATG
ACCGAAGAGG TCACCACCGA GCAGAACCGC ATCGAACTGC CGCAAATGAC CGAGACGGTG
AAGAATATCT TCATCGACCC ACGCCAGCAC TGGCTGTACG TGATCAACGG CCGTGCCACG
GCCGACGTGT TCAGCCTGCG CGACAAGAGC CTCAACGGCC GTTACAAGTT GTCTGATAGC
GCCGACACCG AAATTACTGC CACGGCCCAG CTGGTTGGCG GCATTTCGCT GATCATCGGT
GACTCCAAGG GGGGGCTGGC CCAGTGGTTC ATGGCCCGTG ACCCGGATGG CGAATCGCGC
TTCAAGCAGA TCCGTACCTT CCAGATGGGC AAGGCGCCGA TCGTGCAGAT CGACGCCGAA
GAGCGCCGCA AGGGCTTCAT CGCCCTGGAC GCCGAAGGCA AACTGGGCGT GTTCCACAGC
ACTGCACACC GAACCCTGCT GGTAGAGCCG GCTGCCGAAG GCCCTGGTAC GCTGGCCCTG
TCGCCACGCG CCAACCGCAT CATCATCGAA GAAGGCGGCA AGTTGTTGCC GTTGAGCCTG
CGCAACCCGC ACCCGGAAGT TTCGTTCAGC GCGCTGTGGG GCAAGGTGTG GTACGAGAAC
TACGACGAGC CGAAATACGT CTGGCAATCG ACCGCGTCGA ACACTGACTT CGAGCCCAAA
CTGAGCCTGT CGCCGCTGAC CTTCGGAACC CTGAAGGCCG CGTTCTACGC CATGATCCTG
GCCGCCCCGC TGGCCATTGC CGCAGCCATC TACACCGCCT ACTTCATGGC CCCGCGCATG
CGCCGCAAGG TCAAGCCGGT GATCGAGCTG ATGGAAGCGA TGCCGACGGT GATCCTCGGC
TTCTTCGCCG GCCTGTTCCT GGCCCCGTAC CTGGAAGGCC ACCTGCCCGG TGTGTTCAGC
CTGTTCCTGC TGATGCCGAT CGGTATCCTG CTGGCCGGCT TCTTCTGGAG CCGGTTGCCG
GAGTCGATCC GCCTGCGTGT ACCGGATGGT TGGGAAGCGG CGATCCTGAT TCCGGTCATC
CTGTTCACTG GCTGGTTCGC CCTGACCATG AGCCCGCACC TGGAAAGCTG GTTCTTCGGC
GGCGACATGC GCCTGTGGAT CACCAACGAT TTAGGCATCA CCTACGACCA GCGCAACGCC
CTGGTAGTCG GTATCGCCAT GGGCTTCGCG GTCATCCCGA ACATCTACTC GATTGCCGAA
GATGCCGTGT TCAGTGTGCC GCGCAGTCTG ACCCTGGGCT CGCTGGCACT GGGGGCGACG
CCTTGGCAGA CCCTGACCCG CGTGGTCATC CTCACCGCCA GCCCGGGCAT CTTCTCGGCG
TTGATGATCG GCATGGGCCG TGCGGTAGGC GAGACCATGA TCGTGCTGAT GGCTACCGGC
AACACGCCGG TGATGGAGAT GAACCTGTTC GAGGGCATGC GCACCTTGGC CGCCAACGTG
GCTGTGGAAA TGCCGGAATC GGAAGTCGGT GGCAGCCACT ATCGCGTGCT GTTCCTGGCC
GCCCTGGTGC TGCTGATGTT CACCTTCATC ATGAACACCT TGGCCGAGCT GATTCGCCAG
CGTCTGCGCA AGAAATACTC GTCGCTTTGA
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| Protein sequence | MIALEEQNQV GMRVSDKGQA LFFDTKTGNE LKRVELPVPA DTQVTSISTD QPGSALVVLG
LSNGQALVFQ HTYKITYPDN KKTISPGIDY PYGEQSFVLD EQGRALDHVS VNVNGDTLLL
AGSTGAHLQV VELTRTENMM TEEVTTEQNR IELPQMTETV KNIFIDPRQH WLYVINGRAT
ADVFSLRDKS LNGRYKLSDS ADTEITATAQ LVGGISLIIG DSKGGLAQWF MARDPDGESR
FKQIRTFQMG KAPIVQIDAE ERRKGFIALD AEGKLGVFHS TAHRTLLVEP AAEGPGTLAL
SPRANRIIIE EGGKLLPLSL RNPHPEVSFS ALWGKVWYEN YDEPKYVWQS TASNTDFEPK
LSLSPLTFGT LKAAFYAMIL AAPLAIAAAI YTAYFMAPRM RRKVKPVIEL MEAMPTVILG
FFAGLFLAPY LEGHLPGVFS LFLLMPIGIL LAGFFWSRLP ESIRLRVPDG WEAAILIPVI
LFTGWFALTM SPHLESWFFG GDMRLWITND LGITYDQRNA LVVGIAMGFA VIPNIYSIAE
DAVFSVPRSL TLGSLALGAT PWQTLTRVVI LTASPGIFSA LMIGMGRAVG ETMIVLMATG
NTPVMEMNLF EGMRTLAANV AVEMPESEVG GSHYRVLFLA ALVLLMFTFI MNTLAELIRQ
RLRKKYSSL
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