| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2944 |
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| Symbol | |
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| ID | 8133899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3319891 |
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| End bp | 3322059 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866227 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003018503 |
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| Protein GI | 253689313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAAA CAGGCAACAC ATCACAGTAT CGGGATCGTC GGCGAGCGTG GGTAGATCGT
TTGGTTCACC GCATTGTTGC GGGCAGTGGG CTGCTGGTGC TGGCTATGCT GTTGTTAATC
TTCTTCTATC TTCTGTATGT GGTGACGCCA CTGTTCCTTT CTCCCACGGT TAATGGTCAA
AAAACGGTGC AGCGCCAGAA TGGAGAAGCG TCTCTGGCGT TGGGGCTTAG CGACAATGGG
CAGATTGGGT TTCGCATCGA TAGTCAGGGC TATGGGGAGT TTATCCCGTT CGCGGAAAGC
CAGCCCATGT CGCGCATCCG GCTGGTTCCT GCGCTGAGTT TACTGGCGCA AAGTCAGGGG
GAGCGGCAGA CTTATGCCCT GAGCCAGCCT GACGGCCGTT TAGTTTTCGT GCAGCCCGTG
TTATCGCGTA CAGAAAACCG TTCTCCTGTC TGGGTTTATC CACTGGGTGA ACAGGCCTAT
TCGCTTGGAT TGCCTGCGCA GCCGTTGCGT CATCTGGCGG TGGCGGCGGT GGACGAAACG
CATGCCGTTG TGGCGGCCAT CGGGCAGGAA AACGCGTTGC TTATTGCCGA TATTGATGAA
AACGGCGTGC GGCAACGGGC ACAGATTACG CTGCCGGCTG GCGTGGTTAG CCAACTGCTG
CTGACGCCAG ACGGACAGCA GGTCTATTTG CTCAGCGGTA ACACATTAAC GCTGTGGCAG
GTGGGGACGA ACGCGCTGAC GCTGCGAGAA GAGCGGCAAT TACAGTTGGC GGAACCTTTG
CATTTGGCGC TGTTGTCCGG CGGGCGATCA TTGCTGGTAC AGACCGCTGA TGGGCAGATT
AGTCAATGGT TTGAGGTGCC GGGCGACAAG GGCGCGACGT TGACGGAGAT CCGCCAGTTT
CCGCACGTCG CGGGGGAATC GGTGCTGTTG GCAACGGAGG CTCAGCGGCG AGTCTTTGCC
ACATTGAACG CACAGGGTGA ACTGTCACTG TTTGCCAGCA AGCAGTCGCA TGCGCTGCTG
ACGCAGACAT TACCGTCTCA TGCGCAGGGG CTGGCGTTTT CGCCGCACGG ATCTGCCATG
CTGGTTGAAA CGGCGCAGGG CTGGCATCGC TATCAGGTGG ATAATCCGTA TCCCGATATC
GGCTGGCGCG GGCTGTGGCA AAAATTGTGG TATGAGAATT ATCCGGAGCC TGCCTATATC
TGGCAATCCA CGTCTGCGGA TGACAGTTAT CAAGCCAAAT TCAGCATGAT GCCGCTAATG
CTGGGCACGA TGAAAGCGGC GATTTACGCC ATGCTGTTTG CTACGCCGTT GGCGCTGTCC
GCCGCGATTT ACACCGCCTG CTTTATGTCG CCGACGCTAC GACGCTGGAT CAAACCCACG
CTGGAAATCA TGGGCGCGCT GCCGACGGTT GTCGTTGGCT TGATTGCGGC CATCTGGCTG
GCGCCGCATT TTGCGACCTA TCTGTCTGCG ATTCTGGTTA TGCCGATTTT ATGGATGCTG
GCCGTGCTCG GCTGCGGCTG GCTGATTGAA TGCCTGCCGA CGCGCTGTCG TCTCCGTTTC
CCGGCAGGAT GGGACGTACT CTTCCTGATT CCCACGATCC TGCTGACATT TGTGGTCGGC
TGTTGGATTG CGCCACGTAT GGAAATCTGG GTATTGGGAC AACCACTGTA TCAGTGGCTG
GGCGATGATT TTGTGCAACG CAATACGCTG GTGGCCGGTG TCGCTCTCGG TTTTGCGCTG
ATTCCGCTGA TTTTTTCGCT GGCGGAAGAT GCCTTGTTCA GCGTACCGGC TCGTTTGAGT
CAGGGCTCGC TGGCGCTGGG TGCGACGGCG TGGCAAACCC TGTGGCGCGT CGTGCTGCCG
TCCGCCAGTG CCGGAATTTT CGCTGCGCTG ATGCTGAGTT TTGGCCGTGC CGTGGGGGAA
ACCATGATTG TGCTTATGGC GACAGGCAAC ACGCCGATTA TGGATGAAGG TTTGCTTCAG
GGGCTGCGTT CGCTGGCGGC GAATATTGCC ATTGAAATGC CAGAAGCCGT GACAAACAGC
GGCCACTATC GGGTGCTGTT TTTAACGGCA TTAGCGCTGT TTGTGTTCAC ATTCATCGTG
AATACGCTGG CTGAAACTAT CCGGCAGCGT TTACGTCAAC GCTACCGCGA TGAAGGAGAA
AACGCGTGA
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| Protein sequence | MVKTGNTSQY RDRRRAWVDR LVHRIVAGSG LLVLAMLLLI FFYLLYVVTP LFLSPTVNGQ
KTVQRQNGEA SLALGLSDNG QIGFRIDSQG YGEFIPFAES QPMSRIRLVP ALSLLAQSQG
ERQTYALSQP DGRLVFVQPV LSRTENRSPV WVYPLGEQAY SLGLPAQPLR HLAVAAVDET
HAVVAAIGQE NALLIADIDE NGVRQRAQIT LPAGVVSQLL LTPDGQQVYL LSGNTLTLWQ
VGTNALTLRE ERQLQLAEPL HLALLSGGRS LLVQTADGQI SQWFEVPGDK GATLTEIRQF
PHVAGESVLL ATEAQRRVFA TLNAQGELSL FASKQSHALL TQTLPSHAQG LAFSPHGSAM
LVETAQGWHR YQVDNPYPDI GWRGLWQKLW YENYPEPAYI WQSTSADDSY QAKFSMMPLM
LGTMKAAIYA MLFATPLALS AAIYTACFMS PTLRRWIKPT LEIMGALPTV VVGLIAAIWL
APHFATYLSA ILVMPILWML AVLGCGWLIE CLPTRCRLRF PAGWDVLFLI PTILLTFVVG
CWIAPRMEIW VLGQPLYQWL GDDFVQRNTL VAGVALGFAL IPLIFSLAED ALFSVPARLS
QGSLALGATA WQTLWRVVLP SASAGIFAAL MLSFGRAVGE TMIVLMATGN TPIMDEGLLQ
GLRSLAANIA IEMPEAVTNS GHYRVLFLTA LALFVFTFIV NTLAETIRQR LRQRYRDEGE
NA
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