| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2627 |
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| Symbol | |
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| ID | 4255234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3104797 |
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| End bp | 3107055 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123305 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_738669 |
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| Protein GI | 114048119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTC AGGTCATTCA ACCTGGTTCT GCGCCGCAAA GTATGCTGAA AGGCGGACGT
TCAAGTCGCA GGGCATTTAA GGATAAAGCG GCTCAAATTG GGGTCACGAT TGGCGGCACT
ATGGTGTTTG TCGCCTTATT GTTGATCTTC TTCTATTTGC TGTACGTGAT TAAACCCATT
TTCGACAGCG CGGATGTGAC TCCCGTTAAA AGCGTGAGTT ATCAACATGC TGAAGTCGCG
ACCCTGATGG TCGGTGCCGA CGAGCAAAAT GAGGTTATGT ATCGCGTGGC CGCCGATGGC
CAAGTGGATT TCTACACTGT TGCCGATGGC AGCTTACTCT CCAGTTTTAC ACCGCCATTA
CCTGCGGGTG TGAGCGTAAC TAGCGCCGCG ATTGCCGCGC CGAGTGAGCA ACGCTTCGCA
CTGGGGTTAA GTAACGGTCA AGCCTTAATC GTAGGGATTG AGTTTGGCTT AAGTTACCCT
AACAACAAGC GCCTCATTAC CCCAAAACTG CGTTACAGTG CGGGTGAAGC GCCGATCACT
ATCGATGAGT CGGGCAGCGC TATTCATCAT TTAGCCTTTA GTTACAGCAA CGATAAAATC
AGCTTCGCCT ACCAAGATGA CAATGGTGCT TGGCGTTTAA GCCGTCTCGA AGGTCAAGAA
AACATGATGA CCGAAGAGGT GGAATGGACG ACCACAAGTG CGCTGCTGCC CGATGCACCT
AAAAAAGTCG CGCACCAATT GATGACGCCA GACCAACGCC AATTGATGTT GCAAATGGGC
AACAAGGTGT TTATCTACAA TATCCGTGAT ATTGAGAGCC TGGATTTAAT GCAGGTAATT
GATGCGGAAA AGGAAAAATC TAAGGTTAAC AACATTGCCT TACTCGCCGG TGCCAGCTCG
ATTCTGGTGA GCTACGACAC GGGTGTGGTA ACCCAGTACT TCCAAGTGAA TGGTCCAAAA
GGCCGTTTAT ACAAAGAGAT CCGTGAGTTT ACCGATTTAC CGCCAGTGAC CTCGATTGCC
TCTGAGTTCT ACCGTAAAAG CTTTGCCGTG GTGAGCCCAG AGGGTGAGTT ATCACTCCTG
TACACCACCA GTGAGCGCGA GCTGTTTGAT GAAAAGTTCG ATCTTAAAAA CCCAGGCGTG
ATGGGCTTTA GCCCTCGTTC TAACGGCCTA GTGGTCGAAG CGAACAAGCA ACTGAATATC
TTCCATGTCG AAAACTCGCA CCCTGAAGTG TCTTGGAGCG CGCTGTGGAA TAAGGTGTGG
TACGAAGGTT ATCCAGAGCC TAAGTTTGTG TGGCAATCCA CCTCAGGTAG CGATGACTTT
GAAGCCAAAC TTAGCTTAAT GCCATTGGCC TACGGCACCA TGAAGGCGGC GTTCTATGCC
ATGCTGTTTG CCGTGCCATT AGCGATTGCG GGCGCCATCT ATACCGCTTA CTTTATGTCG
CCAAAGGTGC GCGGCATTGT TAAGCCAACG ATTGAAATCA TGGAAGCCTT ACCGACGGTT
ATCTTAGGTT TCCTCGCCGG ACTTTGGCTA GCACCGCTGA TTGAAGAACA TCTACCGGGC
ATCCTAATAC TGCTGATCCT GCTGCCGACG GCGATTCTGG TGTCGGCTTA CTCTTGGAGC
AAGTTACCCG GCCAGTGGAA ACAACGTCTG CCCGAAGTCT ATCAAGAGCT GATGCTCATT
CCGGTTATCT GTTTTGTGGG TTGGTTCTCC TTTGCCATCA GCCCGATGAT CGAAGTGGCG
CTGTTTGATG GTAACACTCG TCAATTTATC ACTAACGAAT TAGGCATCAC CTTCGACCAA
CGTAACGCGC TGGTGGTGGG TATCGCCATG GGCTTTGCGG TTATTCCAAC GATTTTCTCG
ATTGCCGAAG ACGCGATTTT CTCTGTGCCA CGCCATTTAT CCAACGGCAG TTTGGCGCTG
GGTGCTACGC CTTGGCAAAC CCTGACACGT GTCGTGCTGT TGACTGCAAG CCCAGGGATT
TTCTCTGCGG TCATGATGGG TCTTGGCCGC GCTGTGGGTG AAACCATGAT CGTACTGATG
GCAACGGGTA ACACCGCCAT CATGGAATGG AGCGTGTTTG AAGGTATGCG TACGCTGGCG
GCTAACATCG CGGTGGAAAT GCCAGAGTCG GCGATTGGCA GCTCGCACTA CCGAGTGCTG
TTCCTCGCAG CCTTCGTTCT GTTCGTATTT ACCTTCTTCT TTAACACGAT TGCCGAAGTG
GTAAGACAGC GTCTACGTGA CCGCTATAGC TCGCTGTAA
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| Protein sequence | MESQVIQPGS APQSMLKGGR SSRRAFKDKA AQIGVTIGGT MVFVALLLIF FYLLYVIKPI
FDSADVTPVK SVSYQHAEVA TLMVGADEQN EVMYRVAADG QVDFYTVADG SLLSSFTPPL
PAGVSVTSAA IAAPSEQRFA LGLSNGQALI VGIEFGLSYP NNKRLITPKL RYSAGEAPIT
IDESGSAIHH LAFSYSNDKI SFAYQDDNGA WRLSRLEGQE NMMTEEVEWT TTSALLPDAP
KKVAHQLMTP DQRQLMLQMG NKVFIYNIRD IESLDLMQVI DAEKEKSKVN NIALLAGASS
ILVSYDTGVV TQYFQVNGPK GRLYKEIREF TDLPPVTSIA SEFYRKSFAV VSPEGELSLL
YTTSERELFD EKFDLKNPGV MGFSPRSNGL VVEANKQLNI FHVENSHPEV SWSALWNKVW
YEGYPEPKFV WQSTSGSDDF EAKLSLMPLA YGTMKAAFYA MLFAVPLAIA GAIYTAYFMS
PKVRGIVKPT IEIMEALPTV ILGFLAGLWL APLIEEHLPG ILILLILLPT AILVSAYSWS
KLPGQWKQRL PEVYQELMLI PVICFVGWFS FAISPMIEVA LFDGNTRQFI TNELGITFDQ
RNALVVGIAM GFAVIPTIFS IAEDAIFSVP RHLSNGSLAL GATPWQTLTR VVLLTASPGI
FSAVMMGLGR AVGETMIVLM ATGNTAIMEW SVFEGMRTLA ANIAVEMPES AIGSSHYRVL
FLAAFVLFVF TFFFNTIAEV VRQRLRDRYS SL
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