| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5375 |
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| Symbol | |
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| ID | 5873190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5998887 |
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| End bp | 6001175 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550511 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001671592 |
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| Protein GI | 167036361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.690335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC TGGCCAATTC CAACATGACC CAAAACTCCC AGCCCGTGCG CATTGATTTC
AATACGCCCG AGTTGCAACG CAAGCGCCGC ATGCGCGCGC TCAAGGACCG CCTGACCCGC
TGGTATGTGC TGGTCGGCGG TCTTGCCGTA CTGGCGGCAA TCACCCTGAT CTTCTTCTAC
CTGGCGTACG TGGTACTGCC ACTGTTCCAG GGCGCCCAGC TGACCAGCAA GAAAGCCCTG
GAGCCGACCT GGCTGCAGCA GGATGCCGGC AACCCGCTGA TGATCGCGCT TGAAGAGCAG
AACCTGGTGG GGATGCGGGT TTCGGACAAG GGCCAGGCAT TGTTCTTCGA TACCAAAACC
GGCAACGCGC TCAAGCGGGT CGACCTGCCG GTGCCGGCAG ACACCCAGGT CACGTCGATC
AGTACCGACC AGCCGGGCAG CCCGCTGGTG GTGCTTGGCT TGTCCAATGG CCAGGCGCTG
GTGTTCCACC ACACCTACAA GATCACCTAC CCCGACAACA AGAAAACCAT CGCCCCCGGC
ATCGACTACC CGTACGGCGA GCAGCCGTTC GTGCTCGACG AACAGGGCCG CGCGCTGGAG
CACGTGAGCG TCAACGTCAA TGGCGACACC TTGCTGCTGG CCGGTTCCAC TGGCGCGCAC
CTGCAGGTGG TCGAGCTGAC TCGCACGGAA AACATGATGA CCGAAGAGGT CACCACCGAG
CAGAACCGTA TCGCCCTGCC GCAGATGACC GAAACGGTGA AGAACATCTT CATCGACCCG
CGCCAGCAGT GGTTGTACGT GATCAACGGT CGCGCCACGG CTGACGTGTT CAGCCTGCGC
GACAAGAGCC TCAACGGCCG TTACAAGTTG TCTGAAAGCG CCGACACTGA AATTACCGCC
ACGGCCCAGC TGGTCGGTGG CATTTCGCTG ATCATCGGTG ACTCCAAGGG CGGCCTGGCC
CAGTGGTTCA TGGCCCGCGA CCCGGATGGC GAATCGCGCT TCAAGCAGAT TCGTACCTTC
CAGATGGGCA AGGCGCCTAT CGTGCAGATC GACGCCGAAG AGCGCCGCAA GGGCTTCATC
GCCCTCGACG CCGACGGCAA GCTGGGCGTG TTCCACAGCA CCGCGCACCG TACCTTGCTG
GTCGAGCCGG CTGCCGAAGG CCCTGGCATC CTGGCCCTGT CGCCACGCGC CAACCGCATC
ATCATCGAAG AAGGTGGCAA GCTGCTGCCG CTGAGCCTGC GCAACCCGCA CCCGGAGGTT
TCCTTCAGTG CGCTGTGGGG CAAGGTGTGG TACGAGAACT ACGACGAACC CAAGTACGTC
TGGCAATCGA CCGCTTCGAA CACCGACTTC GAGCCCAAGC TCAGCCTGTC GCCGCTGACC
TTCGGTACCC TCAAGGCCGC GTTCTACGCG ATGATCCTGG CCGCCCCGCT GGCCATTGCC
GCTGCCATCT ACACCGCCTA CTTCATGGCC CCTGGCATGC GCCGCAAGGT CAAGCCGGTG
ATCGAGCTGA TGGAAGCGAT GCCGACGGTG ATCCTCGGCT TCTTCGCCGG CCTGTTCCTG
GCCCCATACC TGGAAGGCCA CTTGCCGGGT GTGTTCAGCC TGTTCCTGCT GATGCCGTTT
GGCATCCTGC TGGCCGGCTT CGTCTGGAGC CGCCTGCCGG AGTCGATCCG CCTGCGTGTG
CCGGATGGCT GGGAAGCGGC GATCCTGATC CCGGTCATCC TGTTCACCGG CTGGTTCGCC
CTGACCATGA GCCCGCACCT GGAAAGCTGG TTCTTCGGCG GTGACATGCG CCTGTGGATC
ACCAACGACC TAGGTATCAC CTACGACCAG CGCAACGCCC TGGTAGTGGG CATCGCCATG
GGCTTCGCGG TCATCCCGAA CATCTATTCC ATTGCCGAAG ATGCGGTGTT CAGCGTGCCA
CGCAGCCTGA CCCTCGGCTC GCTGGCACTG GGCGCGACGC CCTGGCAGAC CCTGACCCGC
GTGGTCATCC TCACCGCCAG CCCAGGCATC TTCTCGGCGT TGATGATCGG CATGGGCCGG
GCAGTGGGCG AGACCATGAT CGTGCTGATG GCCACCGGCA ACACCCCGGT GATGGAAATG
AACCTGTTCG AAGGCATGCG CACCCTGGCC GCCAACGTGG CCGTGGAAAT GCCGGAATCG
GAAGTCGGTG GCAGCCACTA TCGCGTGCTG TTCCTGGCCG CCCTGGTGCT GCTGATGTTC
ACCTTCATCA TGAACACCTT GGCCGAGCTG ATTCGCCAGC GTCTGCGCAA GAAATACTCG
TCGCTTTGA
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| Protein sequence | MNDLANSNMT QNSQPVRIDF NTPELQRKRR MRALKDRLTR WYVLVGGLAV LAAITLIFFY
LAYVVLPLFQ GAQLTSKKAL EPTWLQQDAG NPLMIALEEQ NLVGMRVSDK GQALFFDTKT
GNALKRVDLP VPADTQVTSI STDQPGSPLV VLGLSNGQAL VFHHTYKITY PDNKKTIAPG
IDYPYGEQPF VLDEQGRALE HVSVNVNGDT LLLAGSTGAH LQVVELTRTE NMMTEEVTTE
QNRIALPQMT ETVKNIFIDP RQQWLYVING RATADVFSLR DKSLNGRYKL SESADTEITA
TAQLVGGISL IIGDSKGGLA QWFMARDPDG ESRFKQIRTF QMGKAPIVQI DAEERRKGFI
ALDADGKLGV FHSTAHRTLL VEPAAEGPGI LALSPRANRI IIEEGGKLLP LSLRNPHPEV
SFSALWGKVW YENYDEPKYV WQSTASNTDF EPKLSLSPLT FGTLKAAFYA MILAAPLAIA
AAIYTAYFMA PGMRRKVKPV IELMEAMPTV ILGFFAGLFL APYLEGHLPG VFSLFLLMPF
GILLAGFVWS RLPESIRLRV PDGWEAAILI PVILFTGWFA LTMSPHLESW FFGGDMRLWI
TNDLGITYDQ RNALVVGIAM GFAVIPNIYS IAEDAVFSVP RSLTLGSLAL GATPWQTLTR
VVILTASPGI FSALMIGMGR AVGETMIVLM ATGNTPVMEM NLFEGMRTLA ANVAVEMPES
EVGGSHYRVL FLAALVLLMF TFIMNTLAEL IRQRLRKKYS SL
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