| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5236 |
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| Symbol | |
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| ID | 5194824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5878598 |
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| End bp | 5880886 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589719 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001270538 |
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| Protein GI | 148550436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.644471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.245739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC TGGCCAATTC CAACATGACC CAAAACTCCC AGCCCGTGCG CATTGATTTC
AATACGCCCG AGTTGCAACG CAAGCGCCGC ATGCGCGCGC TCAAGGACCG CCTGACCCGC
TGGTATGTGC TGGTAGGCGG GCTTGCCGTA TTGGCGGCAA TCACGTTGAT CTTCTTCTAC
CTGGCTTATG TGGTGTTGCC ACTGTTCCAG GGCGCCGAGC TGACCAGCAA GAAAGCCCTG
GAGCCGACCT GGCTGCAGCA GGATGCCGGT AAGCCACTGA TGATCGCGCT TGAAGAGCAG
AATCAGGTGG GGATGCGTGT TTCGGACAAG GGCCAGGCAT TGTTCTTCGA TACAAAGACC
GGTAACGAAC TCAAGCGTGT CGAACTGCCC GTGCCGGCAG ACACCCAGGT CACGTCCATC
AGTACTGACC AGCCGGGCAG CGCGCTGGTG GTGCTGGGCC TGTCCAATGG CCAGGCGCTG
GTTTTCCAGC ACACCTACAA GATCACCTAC CCGGACAACA AGAAAACCAT CACCCCTGGC
ATCGACTACC CGTACGGCGA GCAATCGTTC GTGCTCGACG AGCAGGGGCG TGCGCTGGAC
CACGTCAGCG TCAACGTCAA CGGCGACACC CTGCTGCTGG CCGGCTCTAC CGGTGCTCAC
CTGCAGGTGG TCGAGCTGAC CCGCACGGAA AACATGATGA CCGAAGAGGT CACCACCGAG
CAGAACCGCA TCGAACTGCC GCAAATGACC GAGACGGTGA AGAATATCTT CATCGACCCA
CGCCAGCACT GGCTGTACGT GATCAACGGC CGTGCCACGG CCGATGTGTT CAGCCTGCGC
GACAAGAGCC TCAACGGCCG TTACAAGTTG TCTGATAGCG CCGACACCGA AATTACTGCC
ACGGCCCAGC TGGTTGGCGG CATTTCGCTG ATCATCGGTG ACTCCAAGGG CGGGCTGGCC
CAGTGGTTCA TGGCCCGCGA CCCAGATGGC GAATCGCGCT TCAAGCAGAT CCGTACCTTC
CAGATGGGCA AGGCGCCGAT CGTGCAGATC GACGCCGAAG AGCGCCGCAA GGGCTTCATC
GCCCTCGACG CCGAAGGCAA ACTGGGCGTG TTCCACAGCA CTGCACACCG AACCCTGCTG
GTAGAGCCGG CTGCCGAAGG CCCTGGCACG CTGGCCCTGT CGCCACGCGC CAACCGCATC
ATCATCGAAG AAGGCGGCAA GTTGTTGCCG TTGAGCCTGC GCAACCCGCA CCCGGAAATT
TCGTTCAGCG CGCTGTGGGG CAAGGTGTGG TACGAGAACT ACGACGAGCC GAAATACGTC
TGGCAATCGA CCGCGTCGAA CACTGACTTC GAGCCCAAAC TGAGCCTGTC GCCGCTGACC
TTCGGAACCC TGAAGGCCGC GTTCTACGCC ATGATCCTGG CCGCCCCGCT GGCCATTGCC
GCAGCCATCT ACACCGCCTA CTTCATGGCC CCGCGCATGC GCCGCAAGGT CAAGCCGGTG
ATCGAGCTGA TGGAAGCGAT GCCGACGGTG ATCCTCGGCT TCTTCGCCGG CCTGTTCCTG
GCCCCGTACC TGGAAGGCCA CCTGCCCGGT GTGTTCAGCC TGTTCCTGCT GATGCCGATC
GGTATCCTGC TGGCCGGCTT CTTCTGGAGC CGGCTGCCGG AGTCGATCCG CCTGCGTGTA
CCGGATGGTT GGGAAGCGGC GATCCTGATT CCGGTCATCC TGTTCACCGG CTGGTTCGCC
CTGACCATGA GCCCGCACCT GGAAAGCTGG TTCTTCGGCG GCGACATGCG CCTGTGGATC
ACCAACGATT TAGGCATCAC CTACGACCAG CGCAACGCCC TGGTAGTCGG TATCGCCATG
GGCTTCGCGG TCATCCCGAA CATCTACTCG ATTGCCGAAG ATGCCGTGTT CAGTGTGCCG
CGCAGTCTGA CCCTGGGCTC GCTGGCACTG GGCGCGACGC CTTGGCAGAC CCTGACTCGC
GTGGTCATCC TCACCGCCAG CCCGGGCATC TTCTCGGCGT TGATGATCGG CTTGGGCCGT
GCGGTAGGCG AGACCATGAT CGTGCTGATG GCTACCGGCA ACACGCCGGT GATGGAGATG
AACCTGTTCG AGGGCATGCG CACCCTGGCC GCCAACGTGG CTGTGGAAAT GCCGGAATCG
GAAGTCGGTG GCAGCCACTA TCGCGTGCTG TTCCTGGCCG CCCTGGTGCT GCTGATGTTC
ACCTTCATCA TGAACACCTT GGCCGAGCTG ATTCGCCAGC GTCTGCGCAA GAAATACTCG
TCGCTTTGA
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| Protein sequence | MNDLANSNMT QNSQPVRIDF NTPELQRKRR MRALKDRLTR WYVLVGGLAV LAAITLIFFY
LAYVVLPLFQ GAELTSKKAL EPTWLQQDAG KPLMIALEEQ NQVGMRVSDK GQALFFDTKT
GNELKRVELP VPADTQVTSI STDQPGSALV VLGLSNGQAL VFQHTYKITY PDNKKTITPG
IDYPYGEQSF VLDEQGRALD HVSVNVNGDT LLLAGSTGAH LQVVELTRTE NMMTEEVTTE
QNRIELPQMT ETVKNIFIDP RQHWLYVING RATADVFSLR DKSLNGRYKL SDSADTEITA
TAQLVGGISL IIGDSKGGLA QWFMARDPDG ESRFKQIRTF QMGKAPIVQI DAEERRKGFI
ALDAEGKLGV FHSTAHRTLL VEPAAEGPGT LALSPRANRI IIEEGGKLLP LSLRNPHPEI
SFSALWGKVW YENYDEPKYV WQSTASNTDF EPKLSLSPLT FGTLKAAFYA MILAAPLAIA
AAIYTAYFMA PRMRRKVKPV IELMEAMPTV ILGFFAGLFL APYLEGHLPG VFSLFLLMPI
GILLAGFFWS RLPESIRLRV PDGWEAAILI PVILFTGWFA LTMSPHLESW FFGGDMRLWI
TNDLGITYDQ RNALVVGIAM GFAVIPNIYS IAEDAVFSVP RSLTLGSLAL GATPWQTLTR
VVILTASPGI FSALMIGLGR AVGETMIVLM ATGNTPVMEM NLFEGMRTLA ANVAVEMPES
EVGGSHYRVL FLAALVLLMF TFIMNTLAEL IRQRLRKKYS SL
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