Gene Dhaf_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1250 
Symbol 
ID7258220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1348669 
End bp1349589 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content49% 
IMG OID643561163 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_002457743 
Protein GI219667308 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.125763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA CTCAAGTAAG AGATAAAATT CGCAATAATA GTGCCCAAAA GAAGCATATC 
TCCGATAAGG TGATGCCCAA TTTCTTTTTG CTCATGGCCT CTCTGTCCGT GCTCACAACC 
CTGGGGATTG TCATCATCTT GGTTACGGAT GCCAGCAAGT TTTTCAGCGC GGTTCCCCTG 
ACAGAAGTAT TCAGCACAGA ATTAGCACCC TTAAGAAAAG ACCCTTCTTT CGGAATTTTA 
CCGCTGATCA GCGGTACGAT CATCACCACC CTCATCGCCA TGCTGGTTGC CGTGCCGGTA 
GGTTTGGCGG CGGCAATTTA TTTAAGTCAA TTTGCTTCGG ACAAGTTGAG AAGGGTGTTT 
AAGCCCATGA TGGAAGTCCT GGCAGGCATA CCGACCATCG TGTACGGATT TTTTGCTTAT 
TCTTTTGTTA CTCCCCTGCT GATGAAGATC ATTCCTTCCC TGCAGGCTAA AAATGCCTTA 
AGCCCGGGAC TGGTCATGGG CATTATGATT ATCCCCATGG TGGCTTCCTT GTCGGAGGAT 
GCTATGAATT CAGTGCCGGA GATTATTCGG GAAGGCTCCC TTGGTCTAGG TGCCACAAAG 
CTGGAGACCG CCTTCAAGGT GATCATACCT GGGGCGATCT CCGGAATTAT GGCGTCCATC 
GTCCTGGCCC TATCCAGAGC CATCGGTGAG ACCATGATTG TGACCATCGC CAGCGGCAGC 
TCCAAGAATT TCACCCTCGA TATAACCCAG TCCATGCAGA CCATGACCGC TTATATTGTG 
GAATTTACCA GCGGGGATGC CGGAAGCGGC ACCTTGGGTT ATTACAGTCT TTATGCCGTA 
GGCCTGATCC TGTTTATTTT CACTTTAGGG ATCAACCTGC TTGCTCAATA TATTTCCCGT 
AAATACAGGG AGGTGTATTG A
 
Protein sequence
MEDTQVRDKI RNNSAQKKHI SDKVMPNFFL LMASLSVLTT LGIVIILVTD ASKFFSAVPL 
TEVFSTELAP LRKDPSFGIL PLISGTIITT LIAMLVAVPV GLAAAIYLSQ FASDKLRRVF 
KPMMEVLAGI PTIVYGFFAY SFVTPLLMKI IPSLQAKNAL SPGLVMGIMI IPMVASLSED 
AMNSVPEIIR EGSLGLGATK LETAFKVIIP GAISGIMASI VLALSRAIGE TMIVTIASGS 
SKNFTLDITQ SMQTMTAYIV EFTSGDAGSG TLGYYSLYAV GLILFIFTLG INLLAQYISR 
KYREVY