| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1918 |
|---|
| Symbol | |
|---|
| ID | 5410116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1980823 |
|---|
| End bp | 1982637 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640869156 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_001405076 |
|---|
| Protein GI | 154151458 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component
[COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.396887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCCGGG ACGGCTATTC GATCTTCGAG ACCGTGGGAC CACTCAACTT CCTCTTCGGG
ACGATCTGGG CCCCGGGCGC GTATGTGCCC AGTTACGGGA TTGCCGCACT CATCATCGGT
ACGCTCCTTG TTACACTGGG TGCTATGGTC TTTGCCGTTC CGCTTTCCCT GGGCTGTGCC
ATTTACATCT CTGAACTCGC CTCTCCCCGG ATAAAGAATA TCCTAAAACC GGCCACTGAA
CTTCTCGCAG GCATCCCGTC AGTCGTGTAT GGGTTCTTCG GCATGATCGT ATTAAGCAAC
TTCATTCGCG TTACCTTCAA CATCTCCAGC GGGCAGACCT GGCTTGCCGG GTCGATCCTT
CTGGGCATCA TGGCGCTCCC CACGATCATC AGCGTTTCCG AAGACGCAAT CAGCTCCGTT
CCCCGGGAGT ACCGCGAGGG GTCGCTTGCA ACCGGAGCAA CACGCTGGCA GACCATCAGC
AAAGTGATCG TCCCGGCAGC ACTCTCGGGG ATAGCGGCAG CAATCATCCT TGGGATCGGG
CGTGCCATCG GCGAGACCAT GGCCGTGATC ATGGTCACCG GGAACGCCGC CATCATCCCC
AGTCCCATAT GGAACGTGCT CTCATCAGTC CGCACCCTTA CCGGGACACT TGGGATCGAA
ATGGGTGATG TAGCCATCGG AAGCGAGCAC TACCATGCAC TCTTCGGCGT GGCTGTCGTG
CTCCTCCTTA TTACACTCAT TATCAATATA AGTGCGGTGG CCATCCTCTC CCACCTTGGG
AAATCGGCAG GCCGGGCGAA ACGCCCGTGG CTCGACATCC CCGCTCTTGC ACCGGTGAGG
GAAAAACTCC ACCCGTACTC CCAAAAGATT CTTCTTGCCT TCATCGCGCT CCTGTTCCTT
GCTATCGGTC TCTGGGAAGT ATCAATCGTC ATTGTCCTTG CTGCAGGGGC CTGGCACTAT
GGCCGTGAGC GGTTCTCACG GCGCTCCATT GAACGGGTAG CATTCGGATG CGTCATCGCC
GCGGCAATGG CAGTCCTTGC CATCCTCGCG ATCATCCTTG GGTACATTAT TATAAACGGC
TTGCCGGCCA TATCGTGGCA GTTCCTGACA CAGAGCCCTA CGGACCTGGG CAGGGGTGGC
GGGATCTTCC CGGCGATTGT AGGTACCCTC TATCTTGTGG CAGGCGCCAT CCTGATCGCC
CTTCCCCTTG GGGTTGGGGC CGCAATTTAC CTGATCGAAT ACACCCGGGA AGGAAGGATC
ACCAAGCTGA TCCGGACCGG GGTTGATCTC CTCAATGGGA CGCCCTCGAT CGTCTTTGGT
CTTTTTGGCT TTGCATTCCT GGTTCTCTTC CTCAATGTAG GCGTATCACT TATCGCCGGC
ATGATTACAC TGGCGTTGAT GGTGCTCCCG ACCGTGATCC GAACGACGGA AGAAGCCCTC
AAGAACGTCC CGCAGTCCCT AAGGGAAGGA AGCCTTGCGC TCGGCGCCAC GAAATGGCAG
ACGATCAAAA ACGTGGTCAT CCCACCCGCA GTTCCCGGGA TTGTGACCGG AGCGATCCTA
TCGATCGGCC GGGCCGCCGG GGAGACAGCG CCGATCATGT TCACCGCGGT CGTCTTTTCG
ACCCGGTTTT TACCGACATC GCTTTTCCAG CCGGTGATGG CGCTGCCCTA CCATCTCTTC
ATCTTGTCGA CCAATGTACC CGGCTCTTCG ACCAACAAGT ACGGGACGGC GCTTGTTCTC
CTGATGCTGG TCGTGACATT CTATGCAGTC GCTATCCTGA TCCGGAACCA TTATGCAAAA
AAGGCACGGG GATAA
|
|---|
| Protein sequence | MLRDGYSIFE TVGPLNFLFG TIWAPGAYVP SYGIAALIIG TLLVTLGAMV FAVPLSLGCA
IYISELASPR IKNILKPATE LLAGIPSVVY GFFGMIVLSN FIRVTFNISS GQTWLAGSIL
LGIMALPTII SVSEDAISSV PREYREGSLA TGATRWQTIS KVIVPAALSG IAAAIILGIG
RAIGETMAVI MVTGNAAIIP SPIWNVLSSV RTLTGTLGIE MGDVAIGSEH YHALFGVAVV
LLLITLIINI SAVAILSHLG KSAGRAKRPW LDIPALAPVR EKLHPYSQKI LLAFIALLFL
AIGLWEVSIV IVLAAGAWHY GRERFSRRSI ERVAFGCVIA AAMAVLAILA IILGYIIING
LPAISWQFLT QSPTDLGRGG GIFPAIVGTL YLVAGAILIA LPLGVGAAIY LIEYTREGRI
TKLIRTGVDL LNGTPSIVFG LFGFAFLVLF LNVGVSLIAG MITLALMVLP TVIRTTEEAL
KNVPQSLREG SLALGATKWQ TIKNVVIPPA VPGIVTGAIL SIGRAAGETA PIMFTAVVFS
TRFLPTSLFQ PVMALPYHLF ILSTNVPGSS TNKYGTALVL LMLVVTFYAV AILIRNHYAK
KARG
|
|---|
| |