More than 300 homologs were found in PanDaTox collection
for query gene Pput_2731 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_2731  methyl-accepting chemotaxis sensory transducer  100 
 
 
430 aa  867    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4531  methyl-accepting chemotaxis protein, putative  47.72 
 
 
434 aa  384  1e-105  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4209  chemotaxis sensory transducer  47.99 
 
 
434 aa  381  1e-104  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0935  methyl-accepting chemotaxis protein  42.24 
 
 
407 aa  306  5.0000000000000004e-82  Methylibium petroleiphilum PM1  Bacteria  normal  0.575049  normal 
 
 
-
 
NC_013093  Amir_1957  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
344 aa  209  7e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.25398  n/a   
 
 
-
 
NC_007643  Rru_A0130  chemotaxis sensory transducer  36.9 
 
 
491 aa  208  2e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3461  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
328 aa  176  7e-43  Pseudomonas mendocina ymp  Bacteria  normal  0.948004  normal 
 
 
-
 
NC_010322  PputGB1_3044  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.63 
 
 
325 aa  160  3e-38  Pseudomonas putida GB-1  Bacteria  normal  0.202604  normal 
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  36.32 
 
 
438 aa  119  9.999999999999999e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4355  methyl-accepting chemotaxis sensory transducer  46.96 
 
 
425 aa  118  3e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
428 aa  105  1e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_011884  Cyan7425_2336  signal transduction histidine kinase  29.03 
 
 
3706 aa  103  7e-21  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  57.29 
 
 
546 aa  99.8  8e-20  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1723  multi-sensor hybrid histidine kinase  35.29 
 
 
664 aa  98.2  3e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_3072  PAS/PAC sensor hybrid histidine kinase  28.97 
 
 
689 aa  96.3  8e-19  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0145505 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  55.45 
 
 
559 aa  95.5  2e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  62.86 
 
 
362 aa  95.5  2e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
548 aa  95.5  2e-18  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3136  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27 
 
 
919 aa  94.7  3e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  59.3 
 
 
548 aa  94.4  3e-18  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_011662  Tmz1t_1363  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.95 
 
 
438 aa  93.2  7e-18  Thauera sp. MZ1T  Bacteria  normal  0.4426  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  56.44 
 
 
561 aa  93.6  7e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
362 aa  93.2  9e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2494  PAS/PAC sensor hybrid histidine kinase  35.29 
 
 
663 aa  92.8  9e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1507  methyl-accepting chemotaxis sensory transducer  55.84 
 
 
762 aa  92.8  9e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.463366  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  53.7 
 
 
539 aa  92.4  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_009456  VC0395_0122  methyl-accepting chemotaxis protein  57.14 
 
 
553 aa  92.4  1e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0372  methyl-accepting chemotaxis protein  72.58 
 
 
465 aa  92.4  1e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  79.31 
 
 
418 aa  92.4  1e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  72.46 
 
 
627 aa  92.4  1e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_010571  Oter_0386  multi-sensor hybrid histidine kinase  30.71 
 
 
1342 aa  92.8  1e-17  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  61.97 
 
 
361 aa  92.8  1e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  79.31 
 
 
418 aa  92.4  2e-17  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  55.95 
 
 
485 aa  91.7  2e-17  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  59.49 
 
 
554 aa  91.7  2e-17  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  73.02 
 
 
543 aa  91.7  2e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  63.16 
 
 
544 aa  91.7  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  56.52 
 
 
676 aa  92  2e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0369  methyl-accepting chemotaxis sensory transducer  65.33 
 
 
611 aa  91.7  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
664 aa  92.4  2e-17  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
664 aa  92.4  2e-17  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  56.44 
 
 
561 aa  91.3  3e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
568 aa  91.3  3e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  52.68 
 
 
822 aa  91.3  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0389  methyl-accepting chemotaxis sensory transducer  72.58 
 
 
587 aa  91.3  3e-17  Thermoanaerobacter sp. X514  Bacteria  normal  0.074674  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  69.23 
 
 
548 aa  91.3  3e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
557 aa  91.7  3e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  72.58 
 
 
549 aa  90.9  4e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  73.44 
 
 
645 aa  90.9  4e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  47.83 
 
 
557 aa  90.9  4e-17  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2257  methyl-accepting chemotaxis sensory transducer  55.86 
 
 
603 aa  90.9  4e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_2834  histidine kinase, HAMP region: chemotaxis sensory transducer  72.58 
 
 
671 aa  90.9  4e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.188903  normal 
 
 
-
 
NC_007298  Daro_2883  chemotaxis sensory transducer  69.23 
 
 
537 aa  90.9  4e-17  Dechloromonas aromatica RCB  Bacteria  hitchhiker  7.44547e-18  normal 
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  74.19 
 
 
550 aa  90.9  4e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2644  chemotaxis transducer  76.27 
 
 
280 aa  90.9  4e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.120039  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  73.44 
 
 
549 aa  90.5  5e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  69.23 
 
 
627 aa  90.5  5e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  54.17 
 
 
560 aa  90.1  6e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  51.82 
 
 
570 aa  90.1  6e-17  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  72.86 
 
 
601 aa  90.1  6e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  68.25 
 
 
566 aa  90.1  6e-17  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
560 aa  90.5  6e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  68.66 
 
 
535 aa  90.1  6e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  71.88 
 
 
392 aa  90.1  7e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  53.21 
 
 
569 aa  89.7  8e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  57.45 
 
 
546 aa  90.1  8e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  51.85 
 
 
674 aa  89.7  8e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007298  Daro_2933  histidine kinase, HAMP region: chemotaxis sensory transducer  68.75 
 
 
540 aa  89.7  8e-17  Dechloromonas aromatica RCB  Bacteria  decreased coverage  1.3489100000000001e-18  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  71.88 
 
 
565 aa  90.1  8e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009253  Dred_0384  methyl-accepting chemotaxis sensory transducer  60.81 
 
 
644 aa  89.7  9e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2250  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.84 
 
 
435 aa  89.7  9e-17  Shewanella sp. ANA-3  Bacteria  normal  normal  0.32107 
 
 
-
 
NC_007519  Dde_0558  multi-sensor signal transduction histidine kinase  32.77 
 
 
763 aa  89.7  9e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.043921  n/a   
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  71.43 
 
 
636 aa  89  1e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  72.58 
 
 
549 aa  89.4  1e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0922  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
656 aa  89.4  1e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  70.31 
 
 
543 aa  89.4  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  51.38 
 
 
587 aa  89.4  1e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  59.04 
 
 
624 aa  89.4  1e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0500  methyl-accepting chemotaxis protein  68.75 
 
 
543 aa  89  1e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  60.98 
 
 
675 aa  89.4  1e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_004578  PSPTO_5352  methyl-accepting chemotaxis protein  74.19 
 
 
448 aa  89.4  1e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
495 aa  89  1e-16  Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  67.14 
 
 
495 aa  89.4  1e-16  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_011126  HY04AAS1_0814  methyl-accepting chemotaxis sensory transducer  55.42 
 
 
685 aa  89  1e-16  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4907  PAS  74.19 
 
 
448 aa  89.4  1e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
495 aa  89  1e-16  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_007492  Pfl01_4766  chemotaxis sensory transducer, Pas/Pac sensor  77.59 
 
 
438 aa  89.4  1e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.133836 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  75.41 
 
 
666 aa  89.4  1e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_007519  Dde_1755  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
605 aa  89  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  unclonable  0.000000036302  n/a   
 
 
-
 
NC_010814  Glov_1891  methyl-accepting chemotaxis sensory transducer  77.59 
 
 
509 aa  89.4  1e-16  Geobacter lovleyi SZ  Bacteria  normal  0.745334  n/a   
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
495 aa  89  1e-16  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
495 aa  89  1e-16  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  68.25 
 
 
566 aa  89.4  1e-16  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  64.86 
 
 
422 aa  89  1e-16  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  65.71 
 
 
497 aa  89.4  1e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  68.75 
 
 
647 aa  88.6  2e-16  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  47.17 
 
 
626 aa  88.2  2e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009656  PSPA7_3916  putative chemotaxis transducer  72.58 
 
 
440 aa  89  2e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0741866  n/a   
 
 
-
 
NC_007298  Daro_3112  chemotaxis sensory transducer  43.95 
 
 
541 aa  88.2  2e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0972  methyl-accepting chemotaxis sensory transducer  68.18 
 
 
440 aa  88.6  2e-16  Shewanella baltica OS185  Bacteria  normal  0.803806  n/a   
 
 
-
 
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