| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5352 |
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| Symbol | |
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| ID | 1187038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6084300 |
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| End bp | 6085646 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396671 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_795082 |
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| Protein GI | 28872463 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGAA ACAAGAACAA AGCTGAACTG ACAGCCATGA AGGCCGAGGT AGATGGACTC
AAAGGACTGA CAAGCGCACT GGAAAAATCA ATGGCTGTGG TCGAGCTTGG TCTCGACGGC
AAGATCCTTC GGGCCAACGA TAACTTTCTC GCGACGATGG GCTACCGGGC CGATGAGCTG
ACCAACAAGA CGCACCGCGA CTTCTGCGAA CCGGAAGTAC TTCGCAGCCG CGAGTACGCG
GATCTGTGGG CATCGCTCAA GGCCGGCAAG TTCATCTCCG GGACATTCAA GCGCATCAAC
AAGAACGGCC ACAGTGTCTG GCTTGAAGCC AGCTACAACC CGGTGATCGA CACGCAGGGC
AAAGTCGTCA AGGTGGTCAA GTACGCACTG GACGTCACAC GGCGCGTGAT GCTGGAGAAC
GAGACCAACA GCAAGCTCGC TGCAGTAGAC CGGGCCATGG CGGTCTGCGA ATTCGAGCCC
AACGGCAATG TGATCACCGC CAACGCCAAC TTCCTGCACG TCATGGGTTA TGCGCTGGCC
GAGATCAAAG GCAAGCATCA CAGGTCGTTC TGCGAACCGT CACTGGTCAA CAGCCCGGAG
TATTCCGAGT TCTGGCGCAA GCTGAACAAT GGCGAGTTCA TTGGCGATCA GTTCAAGCGC
CTTGGCAAGC ATGGCCGGGT CGTCTGGCTT GAAGCCACCT ACAACCCGGT CTTCGATGTC
GACGGCAAGC TCTACAAGAT CGTCAAGTTC GCCAGTGACA TTACCGCGCG GGTCGAAAAG
CAGGAGGCCG ACGCACACGG TGCCTCACGC GCTTACCACA TCTCGGCGGA AACCGAGAAA
GTGGCCGAAC AGGGCACGCT GGTGATTCAG GAAACCGCGC GGGAAATGCG TCAGATCGCC
GAAAATATTG GTGCCTCGGC GAAGCTGGTG GGGCAACTCG GGGATCGCTC CGAGCAGATC
ACTGCCATCG TCAACACCAT CCGTGGCATC GCCGACCAGA CCAACCTGCT GGCGCTTAAC
GCCGCCATCG AAGCTGCGCG TGCCGGTGAT CAGGGTCGCG GGTTTGCCGT AGTGGCCGAC
GAAGTGCGGC AACTGGCGGG CCGTACCAGC GGCTCTACCA CCGAGATTGC CGAGATGATT
GGCAAGATCC TCGCGGAAAC ACGCGAAGCC GTGGCCAGCA TGAGTGCCAC ACAGGAAGGT
GCCATTCGTG GTGTGACACT GGCCGATCAG GCCGGACAGG TCATCGTGCA GATCCGTGAC
GGCGCGAGCG ATGCCGTCGA GGCCGTCAAC ATGTTTGCCA CGCGCATGGA CGAAGCTGAC
GCGTTTGCAA AACCGGGCAA GCGATGA
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| Protein sequence | MFGNKNKAEL TAMKAEVDGL KGLTSALEKS MAVVELGLDG KILRANDNFL ATMGYRADEL
TNKTHRDFCE PEVLRSREYA DLWASLKAGK FISGTFKRIN KNGHSVWLEA SYNPVIDTQG
KVVKVVKYAL DVTRRVMLEN ETNSKLAAVD RAMAVCEFEP NGNVITANAN FLHVMGYALA
EIKGKHHRSF CEPSLVNSPE YSEFWRKLNN GEFIGDQFKR LGKHGRVVWL EATYNPVFDV
DGKLYKIVKF ASDITARVEK QEADAHGASR AYHISAETEK VAEQGTLVIQ ETAREMRQIA
ENIGASAKLV GQLGDRSEQI TAIVNTIRGI ADQTNLLALN AAIEAARAGD QGRGFAVVAD
EVRQLAGRTS GSTTEIAEMI GKILAETREA VASMSATQEG AIRGVTLADQ AGQVIVQIRD
GASDAVEAVN MFATRMDEAD AFAKPGKR
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