Gene Psyr_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4209 
Symbol 
ID3369749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5013079 
End bp5014383 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content59% 
IMG OID637654569 
Productchemotaxis sensory transducer 
Protein accessionYP_237277 
Protein GI66047436 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCACC TGTTCAGCCC CCGTCGTGAC AAAAAGGCCC TTCAGCAACT TATTTCCTCG 
CTCAAGGGCG GCACTGAGCC CGCGGTAGGG GGATGTGCTG AAAAAAGTGC GGTACTGGAA
TGCTGGAGCT CGCTGAGCAC CCAGCGTCGC CTCGACGAGC AACGTATTGC CGCGCTTGAG
CAAGAACTGG AAACCGCCCG CCATCTGTTG GGCGAAGCCT CTGCCTCGGC TGCCGCTTAT
GAAACCCGCT TTGATCTGGT CAACCGTGCG TCTAGCGAGG GCCTCTGGGA TATGGAGGTG
GTCGCGGGCG ATCCGGTCAA TCCGAACAAT CGATTCTGGT GGTCGCAGCA ATTTCGCACA
TTGCTCGGTT TCAACGACGA GCGCGATTTC CCCAACGTAC TGGCGAGCTG GGCAGACCGG
CTTCATCCTC AAGATAAACA AGCCTCGCTG GACGCATTTG CCAAACACCT GAATGACCGT
TCCGGCAACA CGCCGTATCG GATCAAGAAT CGTCTGGCGA TGAAGGACGG CACCTACCGC
TGGTTCTATG CCCAGGGCGA AACATTAAGA GACGCACGCG GAACGCCGCT GCGGGTCGCC
GGTTCTCTTC GGGATATTCA CGACGAGCTT GAGCGTGATC TTGAACACGA TGTGATCATT
ACTCGCTTCG AACTCGCTCG GGAGATGCTC TCCGACGGTC TTTGGGACAT GGAAGTCATT
GCCGGCGACC CGGTCAATGC GCGCAATCCT TTCTGGTGGT CCCCCCAGTT CAGGCGCCTG
CTGGGTTTTG AAACGGTCGA AGAGTTTCCT GACGTACTGG ATAGCTGGGC GTCACGGCTG
CACCCTGAAG ACAAGGAGCG CAGTCTGACG GCATTCGGTG CGCACTTGAA TGACCGGACT
GGCAAGACGC CGTTCGATAT CGAGTACCGC CTGAAGATGA AAACTGGCGA GTATCGCTGG
TTCCGTGCGC GCGGCCAGAC TCGCCGCAAT CCCGAAGGTG TTCCGCTGAG GGTGGTCGGT
GCGTTGGTGG ATGTGCATTT GAAACATGAG CAGGACGCTC TTCGCGATAC CGAAGCACAG
CATCAGAAAA ACCTGGAAGA GAACATCGCT CAACTGACCC AGATAGTTGG CACTATCCAG
AGCATTGCCA GCCAGACCAA CCTTCTGGCG CTCAATGCGG CAATCGAGGC TGCGCGCGCC
GGTGAGGCAG GGCGGGGCTT TGCGGTTGTG GCGGATGAAG TCCGCAAGCT GGCGACCAGA
ACGACCGAAG CGACGGAGCA GGCGGCAAGC ATGATGAGCC GCTGA
 
Protein sequence
MLHLFSPRRD KKALQQLISS LKGGTEPAVG GCAEKSAVLE CWSSLSTQRR LDEQRIAALE 
QELETARHLL GEASASAAAY ETRFDLVNRA SSEGLWDMEV VAGDPVNPNN RFWWSQQFRT
LLGFNDERDF PNVLASWADR LHPQDKQASL DAFAKHLNDR SGNTPYRIKN RLAMKDGTYR
WFYAQGETLR DARGTPLRVA GSLRDIHDEL ERDLEHDVII TRFELAREML SDGLWDMEVI
AGDPVNARNP FWWSPQFRRL LGFETVEEFP DVLDSWASRL HPEDKERSLT AFGAHLNDRT
GKTPFDIEYR LKMKTGEYRW FRARGQTRRN PEGVPLRVVG ALVDVHLKHE QDALRDTEAQ
HQKNLEENIA QLTQIVGTIQ SIASQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRKLATR
TTEATEQAAS MMSR