Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0558 |
Symbol | |
ID | 3756467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 580453 |
End bp | 582744 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637781419 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_387054 |
Protein GI | 78355605 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.043921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCCA GAATAACACT TGCCCCGACC CCGAAGCAGT TCGTGGGACG CAGTATTTCC CGCGATCTGA CCATCAGCCT GCTTGTCATG CTTATGGTCG TGGTGGGGGG CATGGCGTCC ATACAGTACA TCAGCCACTC GCGCACGTCG CTGGAAGAGC TGGACAACAA GGCCGATGAA TATATCACGC GCCTGGCCGA CATACTCTCG GTTCCCATAT GGAATTTCGA CACCCGTACC ATCGAACAGA TCGGCAGTGT GTTCACCCAG TACGATCTGG TCAACGAAGT GGTCATCAAA GACCCGGCGG GACACACGCT GTTTTCTGTC ACCAAAGCCC CCGATCCCGA CGCCACACTC ATCCGCCAGC GTGATATTTT TTATGACGGT GAAATAATCG GCAACGTGCG GGTGGTGCTG ACCCTGCGCG AATACAAAAG AAGCCTGCGC CGCATGCTTT CCACCACGGC GCTGACCATC GGCGGGGTTG CGCTGGTCAT TGTGCTGGCA ACGGGTGTTC TGCTGCGTAT TTATCTGCGC CGCCCGCTTG ATGTGCTCTT GTCCAGCATA GACAAAGTTT CAAAGGGTGA TTTCCGCCAC GACTTCAGCA CCATACAGCA GGCCGAACTG GCAGCCATAG CCCGCAGCTT TGCCAGCATG AGCGCAAAGG TTGAAGCGCG CGAAAAAGCC CTGCAGCGCA TGAACAGCCA GCTGCAGGAA GAAGTGGCCG AACGTGAGCG GGCAGAGCAG GCGCTGCGCA ACAGCGAAGA ACGGTATTCT CTGGCCGTCG GCGGCACCAA CGACGGCATA TGGGACTGGG ATCTGATCTC GAATAAAGTG TATTTTTCAC CCCGCTGGAA GGAAATCATC GGTTTTCAGG ACCACGAAAT ACCCAACGAG ATTCCCGAGT GGACCAGCCG CGTGCACCCT GATGATCTGG CCAAGATACT CAAGGCGCAC GAAATGTATC TTTCACGCGA ACTGCCCGCT TTTGAAGTGG AATACAGGCT GCGGCACAAA GACGGCAGCT ACCGCTGGAT TCTGGGACGC GGGCTGGCGC TGTGGAGCGA CGCCGACCAG CCGTACCGCA TGGCCGGTGC ACATACCGAC ATCACCGACA GAAAAGAATC GGAACGCGAA CTGCTGGCCA CCAAAAACCG GCTGGACAAC ATTCTCAATT CCATGCCGTC GCTCATCGTG GGCGTCAGCG ACAACGGCAT CATTCTGCAA TGGAACCGCA CGGCGGAAGA GGAAACCTCC GTTTCCGCCC GCGATGCCAT CGGCACGCCT TTTGAGAACA CGCTGCCTGA ATTCTCTTTT CTCATGGGCA AGGTGCTTCA GTCGCTCAAT TCCGGCGAAA CCATATCACT GGAACGCAAA GCCATCACCT ACAGCGACCG TGTGCGCACG TTTGACATCA TAATCTACCC CGTGACCGAA CGCGGCGAAC ACAGCGCAGT CATACGCATT GACGATGTGA CAGACCGCAT CCGCATTGAA GAGATGATGG TACAGACAGA AAAAATGATG TCCGTGGGCG GACTGGCGGC GGGTATGGCG CACGAAATCA ACAACCCGCT GGGGGGCATT CTGCAGGGGG CGCAAAATAT CGTACGGCGC ATCTCCACAG AGATAAAAGC GAACCATGCC GCTGCGGACG AAGTGGGCTG CGACCTGACG GCCATACGGG CCTATATGGA AAAACGCGGC ATCACCCGGT TCCTTGACGG CATTCAGGAA TCGGGCAACC GTGCGGCAAA AATAGTTTCC AACATGCTGG AGTTCAGCCG CCGCAGCGAG TCGCGCAGAC AGCTGGCCGA CATGCATGCC CTGATGGACA AAACAGTGGA ACTGGCCGCC AACGACTATG ATCTGAAAAA GAAATATGAC TTCAGGCACA TAGAACTTGT CCGCGATTAT GCCCCCGACC TGCCCGGCAT ACACTGCACC CCGACGGAAA TAGAGCAGGT GCTGCTGAAC CTGCTGAAAA ATTCGGCACA AGCCATGGCA GGCAGGCCCA AAGACAGCAC CGAACCGCCG CGCATCACCC TGCGCACCCG CCTGCAACAC GACAAGGTGT GCATTCAGGT GCTCGATAAC GGTCCCGGTA TGGACGAAGA AACCCGCAAG CGGGTTTTTG AACCCTTCTT CACCACCAAA AGTGTGGGAG AAGGTACCGG ACTGGGGCTT TCGGTCTCGT ACTTCATTAT CACCACCAAC CACGGCGGTT CCTTCACCGT GGATTCCGAA CCGGGCAAAG GCGCCTGCTT CACCATTCTG CTGCCGCGCT GA
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Protein sequence | MPPRITLAPT PKQFVGRSIS RDLTISLLVM LMVVVGGMAS IQYISHSRTS LEELDNKADE YITRLADILS VPIWNFDTRT IEQIGSVFTQ YDLVNEVVIK DPAGHTLFSV TKAPDPDATL IRQRDIFYDG EIIGNVRVVL TLREYKRSLR RMLSTTALTI GGVALVIVLA TGVLLRIYLR RPLDVLLSSI DKVSKGDFRH DFSTIQQAEL AAIARSFASM SAKVEAREKA LQRMNSQLQE EVAERERAEQ ALRNSEERYS LAVGGTNDGI WDWDLISNKV YFSPRWKEII GFQDHEIPNE IPEWTSRVHP DDLAKILKAH EMYLSRELPA FEVEYRLRHK DGSYRWILGR GLALWSDADQ PYRMAGAHTD ITDRKESERE LLATKNRLDN ILNSMPSLIV GVSDNGIILQ WNRTAEEETS VSARDAIGTP FENTLPEFSF LMGKVLQSLN SGETISLERK AITYSDRVRT FDIIIYPVTE RGEHSAVIRI DDVTDRIRIE EMMVQTEKMM SVGGLAAGMA HEINNPLGGI LQGAQNIVRR ISTEIKANHA AADEVGCDLT AIRAYMEKRG ITRFLDGIQE SGNRAAKIVS NMLEFSRRSE SRRQLADMHA LMDKTVELAA NDYDLKKKYD FRHIELVRDY APDLPGIHCT PTEIEQVLLN LLKNSAQAMA GRPKDSTEPP RITLRTRLQH DKVCIQVLDN GPGMDEETRK RVFEPFFTTK SVGEGTGLGL SVSYFIITTN HGGSFTVDSE PGKGACFTIL LPR
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