| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0558 |
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| Symbol | |
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| ID | 3756467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 580453 |
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| End bp | 582744 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781419 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_387054 |
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| Protein GI | 78355605 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.043921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCCA GAATAACACT TGCCCCGACC CCGAAGCAGT TCGTGGGACG CAGTATTTCC
CGCGATCTGA CCATCAGCCT GCTTGTCATG CTTATGGTCG TGGTGGGGGG CATGGCGTCC
ATACAGTACA TCAGCCACTC GCGCACGTCG CTGGAAGAGC TGGACAACAA GGCCGATGAA
TATATCACGC GCCTGGCCGA CATACTCTCG GTTCCCATAT GGAATTTCGA CACCCGTACC
ATCGAACAGA TCGGCAGTGT GTTCACCCAG TACGATCTGG TCAACGAAGT GGTCATCAAA
GACCCGGCGG GACACACGCT GTTTTCTGTC ACCAAAGCCC CCGATCCCGA CGCCACACTC
ATCCGCCAGC GTGATATTTT TTATGACGGT GAAATAATCG GCAACGTGCG GGTGGTGCTG
ACCCTGCGCG AATACAAAAG AAGCCTGCGC CGCATGCTTT CCACCACGGC GCTGACCATC
GGCGGGGTTG CGCTGGTCAT TGTGCTGGCA ACGGGTGTTC TGCTGCGTAT TTATCTGCGC
CGCCCGCTTG ATGTGCTCTT GTCCAGCATA GACAAAGTTT CAAAGGGTGA TTTCCGCCAC
GACTTCAGCA CCATACAGCA GGCCGAACTG GCAGCCATAG CCCGCAGCTT TGCCAGCATG
AGCGCAAAGG TTGAAGCGCG CGAAAAAGCC CTGCAGCGCA TGAACAGCCA GCTGCAGGAA
GAAGTGGCCG AACGTGAGCG GGCAGAGCAG GCGCTGCGCA ACAGCGAAGA ACGGTATTCT
CTGGCCGTCG GCGGCACCAA CGACGGCATA TGGGACTGGG ATCTGATCTC GAATAAAGTG
TATTTTTCAC CCCGCTGGAA GGAAATCATC GGTTTTCAGG ACCACGAAAT ACCCAACGAG
ATTCCCGAGT GGACCAGCCG CGTGCACCCT GATGATCTGG CCAAGATACT CAAGGCGCAC
GAAATGTATC TTTCACGCGA ACTGCCCGCT TTTGAAGTGG AATACAGGCT GCGGCACAAA
GACGGCAGCT ACCGCTGGAT TCTGGGACGC GGGCTGGCGC TGTGGAGCGA CGCCGACCAG
CCGTACCGCA TGGCCGGTGC ACATACCGAC ATCACCGACA GAAAAGAATC GGAACGCGAA
CTGCTGGCCA CCAAAAACCG GCTGGACAAC ATTCTCAATT CCATGCCGTC GCTCATCGTG
GGCGTCAGCG ACAACGGCAT CATTCTGCAA TGGAACCGCA CGGCGGAAGA GGAAACCTCC
GTTTCCGCCC GCGATGCCAT CGGCACGCCT TTTGAGAACA CGCTGCCTGA ATTCTCTTTT
CTCATGGGCA AGGTGCTTCA GTCGCTCAAT TCCGGCGAAA CCATATCACT GGAACGCAAA
GCCATCACCT ACAGCGACCG TGTGCGCACG TTTGACATCA TAATCTACCC CGTGACCGAA
CGCGGCGAAC ACAGCGCAGT CATACGCATT GACGATGTGA CAGACCGCAT CCGCATTGAA
GAGATGATGG TACAGACAGA AAAAATGATG TCCGTGGGCG GACTGGCGGC GGGTATGGCG
CACGAAATCA ACAACCCGCT GGGGGGCATT CTGCAGGGGG CGCAAAATAT CGTACGGCGC
ATCTCCACAG AGATAAAAGC GAACCATGCC GCTGCGGACG AAGTGGGCTG CGACCTGACG
GCCATACGGG CCTATATGGA AAAACGCGGC ATCACCCGGT TCCTTGACGG CATTCAGGAA
TCGGGCAACC GTGCGGCAAA AATAGTTTCC AACATGCTGG AGTTCAGCCG CCGCAGCGAG
TCGCGCAGAC AGCTGGCCGA CATGCATGCC CTGATGGACA AAACAGTGGA ACTGGCCGCC
AACGACTATG ATCTGAAAAA GAAATATGAC TTCAGGCACA TAGAACTTGT CCGCGATTAT
GCCCCCGACC TGCCCGGCAT ACACTGCACC CCGACGGAAA TAGAGCAGGT GCTGCTGAAC
CTGCTGAAAA ATTCGGCACA AGCCATGGCA GGCAGGCCCA AAGACAGCAC CGAACCGCCG
CGCATCACCC TGCGCACCCG CCTGCAACAC GACAAGGTGT GCATTCAGGT GCTCGATAAC
GGTCCCGGTA TGGACGAAGA AACCCGCAAG CGGGTTTTTG AACCCTTCTT CACCACCAAA
AGTGTGGGAG AAGGTACCGG ACTGGGGCTT TCGGTCTCGT ACTTCATTAT CACCACCAAC
CACGGCGGTT CCTTCACCGT GGATTCCGAA CCGGGCAAAG GCGCCTGCTT CACCATTCTG
CTGCCGCGCT GA
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| Protein sequence | MPPRITLAPT PKQFVGRSIS RDLTISLLVM LMVVVGGMAS IQYISHSRTS LEELDNKADE
YITRLADILS VPIWNFDTRT IEQIGSVFTQ YDLVNEVVIK DPAGHTLFSV TKAPDPDATL
IRQRDIFYDG EIIGNVRVVL TLREYKRSLR RMLSTTALTI GGVALVIVLA TGVLLRIYLR
RPLDVLLSSI DKVSKGDFRH DFSTIQQAEL AAIARSFASM SAKVEAREKA LQRMNSQLQE
EVAERERAEQ ALRNSEERYS LAVGGTNDGI WDWDLISNKV YFSPRWKEII GFQDHEIPNE
IPEWTSRVHP DDLAKILKAH EMYLSRELPA FEVEYRLRHK DGSYRWILGR GLALWSDADQ
PYRMAGAHTD ITDRKESERE LLATKNRLDN ILNSMPSLIV GVSDNGIILQ WNRTAEEETS
VSARDAIGTP FENTLPEFSF LMGKVLQSLN SGETISLERK AITYSDRVRT FDIIIYPVTE
RGEHSAVIRI DDVTDRIRIE EMMVQTEKMM SVGGLAAGMA HEINNPLGGI LQGAQNIVRR
ISTEIKANHA AADEVGCDLT AIRAYMEKRG ITRFLDGIQE SGNRAAKIVS NMLEFSRRSE
SRRQLADMHA LMDKTVELAA NDYDLKKKYD FRHIELVRDY APDLPGIHCT PTEIEQVLLN
LLKNSAQAMA GRPKDSTEPP RITLRTRLQH DKVCIQVLDN GPGMDEETRK RVFEPFFTTK
SVGEGTGLGL SVSYFIITTN HGGSFTVDSE PGKGACFTIL LPR
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