Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0372 |
Symbol | |
ID | 5134406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 407840 |
End bp | 409237 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640530695 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_001215213 |
Protein GI | 147671621 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCACA TTAAAGGGAA TTGCCCTTTC AGCCATGAAA GATTGCTGCG TTGGGTGGTC CCAGTGACGA ATTTGTTGGC TGCAAATAAG GGCGTATCAA CTATTAAAGG GTCACTTATG TTTCTTTTTC AAAAACAAAA ACCATCGACC AAACCTTCCC ATCAGGACAA TATTGTGCAG TCCCTATCCG AGCATATTGC TTCGATTGAA TTTGATACCT CAGGTAATGT CATCTCTGCT AATCCACTTT TTCTCAATGC CGTTGGTTAT CGGTTAGAGG AGCTTACCGG GAAACATCAT CGTATTTTTT GCTCTCCCGC AGAGTGTCAA TCGCAACAAT ATCAGCAATT TTGGACCTCT CTTGCTCAAG GTAAGTCGCA TTCTGGTACT TTTATGCGCT ACAAAAAAGA TGGTTCACTT TTAGTCTTAG AAGCGACCTA TTTCCCCATC AAAACCGATG GGAAAGTGAG TAGTGTGATG AAAATTGCCA GTGATGTTAC GGAACAATAT CTCCACGCTG AGTCACAACG AGATCTTTTG ACGGCACTGA ACCAAAATTT TGCAGTGATC GAATTTGAAC CTGATGGCAC GATTATTTCT GCAAACAGTG CATTTCTCAA AACAATGGGC TATTCACTCG ACCAAATAAA AGGCAAACAC CATCGCCTGT TCTGCTTTGA TGAGTTCTAT CAGCAACATC CAACCTTTTG GAAAAGCTTG GCGGCAGGGC AAGCTTATTC TGGTCGGTTC TTACGCAAAA ATAGTTATGG TAGTCAGGTA TGGATCCAAG CCTCCTACAG TCCGGTCAAA GATCAAAACA ATAAGGTATA TAAAATTGTC AAGTTCGCCT CAGACATCAC TGCAGAGGTA TTACGTGAAC AGCAAGTAAC AGACGCTGCC AATATCGCCT ATAGCACCTC AGTAGAAACC TCGCAAGTAG CACAAGGCGG GAACCATGTA CTGCAAGATT CAGTTCGTTT AGCAGAAAAA ATGGTGGGCA ATATCGAACA ATCACTACAA CAGATTGAGC AGCTCGTGGT TCTCTCGAAA GATGTCTCTG AAATTGTCAA AACCATCAGT GGTATCGCTG ACCAAACCAA CTTGCTCGCA TTAAATGCAG CGATAGAAGC GGCGCGAGCG GGTGAGCAAG GACGCGGTTT TGCGGTGGTT GCCGATGAAG TGCGTCAACT GGCTTCTCGC ACCTCAAAAG CCACAGAAGA GATCAATCAA GTGGTGAATA AAAACCTCTC CTTAACTGAA GCGGTAACCA GCTCTATTTC TCAAGTCTCT CAGATTGCCA ATGAAACCAA TGGCCGCATT GTGGAAGTGT CAACCATCAT GGAACAGATT TACCAAGGTG CAGAAAATGT TTCTTCGGCG GTCAGCCAAC TCAAATAG
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Protein sequence | MPHIKGNCPF SHERLLRWVV PVTNLLAANK GVSTIKGSLM FLFQKQKPST KPSHQDNIVQ SLSEHIASIE FDTSGNVISA NPLFLNAVGY RLEELTGKHH RIFCSPAECQ SQQYQQFWTS LAQGKSHSGT FMRYKKDGSL LVLEATYFPI KTDGKVSSVM KIASDVTEQY LHAESQRDLL TALNQNFAVI EFEPDGTIIS ANSAFLKTMG YSLDQIKGKH HRLFCFDEFY QQHPTFWKSL AAGQAYSGRF LRKNSYGSQV WIQASYSPVK DQNNKVYKIV KFASDITAEV LREQQVTDAA NIAYSTSVET SQVAQGGNHV LQDSVRLAEK MVGNIEQSLQ QIEQLVVLSK DVSEIVKTIS GIADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRQLASR TSKATEEINQ VVNKNLSLTE AVTSSISQVS QIANETNGRI VEVSTIMEQI YQGAENVSSA VSQLK
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