More than 300 homologs were found in PanDaTox collection
for query gene Mkms_5144 on replicon NC_008705
Organism: Mycobacterium sp. KMS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008146  Mmcs_5056  ribonuclease activity regulator protein RraA  100 
 
 
159 aa  312  9.999999999999999e-85  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5144  ribonuclease activity regulator protein RraA  100 
 
 
159 aa  312  9.999999999999999e-85  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5435  ribonuclease activity regulator protein RraA  98.11 
 
 
159 aa  307  4e-83  Mycobacterium sp. JLS  Bacteria  normal  0.89586  normal  0.892268 
 
 
-
 
NC_008726  Mvan_5682  ribonuclease activity regulator protein RraA  86.62 
 
 
160 aa  270  5.000000000000001e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  hitchhiker  0.00219714 
 
 
-
 
NC_009338  Mflv_1124  ribonuclease activity regulator protein RraA  84.81 
 
 
160 aa  268  2e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.22942  normal 
 
 
-
 
NC_009565  TBFG_13889  ribonuclease activity regulator protein RraA  78.98 
 
 
157 aa  249  9.000000000000001e-66  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0136  regulator of ribonuclease activity A  68.55 
 
 
166 aa  223  7e-58  Gordonia bronchialis DSM 43247  Bacteria  normal  0.657064  n/a   
 
 
-
 
NC_014158  Tpau_0114  regulator of ribonuclease activity A  72.73 
 
 
163 aa  219  8e-57  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.344528  n/a   
 
 
-
 
NC_009664  Krad_2492  regulator of ribonuclease activity A  64.05 
 
 
170 aa  201  3e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0271  regulator of ribonuclease activity A  64.9 
 
 
157 aa  197  5e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1638  regulator of ribonuclease activity A  64.67 
 
 
159 aa  196  7.999999999999999e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.626899 
 
 
-
 
NC_013510  Tcur_1137  regulator of ribonuclease activity A  61.18 
 
 
159 aa  195  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_20270  RraA family protein  62.91 
 
 
155 aa  193  7e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.295098  normal 
 
 
-
 
NC_007333  Tfu_2727  ribonuclease activity regulator protein RraA  59.21 
 
 
163 aa  183  9e-46  Thermobifida fusca YX  Bacteria  normal  0.608878  n/a   
 
 
-
 
NC_014210  Ndas_4363  regulator of ribonuclease activity A  61.07 
 
 
162 aa  182  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8444  regulator of ribonuclease activity A  60.4 
 
 
159 aa  181  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3997  ribonuclease activity regulator protein RraA  54.36 
 
 
176 aa  160  7e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1172  ribonuclease activity regulator protein RraA  52.35 
 
 
161 aa  159  1e-38  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.837665  normal  0.121951 
 
 
-
 
NC_011901  Tgr7_2551  ribonuclease activity regulator protein RraA  49.67 
 
 
161 aa  157  7e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0143021  n/a   
 
 
-
 
NC_011886  Achl_3776  ribonuclease activity regulator protein RraA  55.03 
 
 
161 aa  152  2e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_3096  ribonuclease activity regulator protein RraA  45.1 
 
 
163 aa  145  2.0000000000000003e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2060  ribonuclease activity regulator protein RraA  48.28 
 
 
163 aa  143  1e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.163212  n/a   
 
 
-
 
NC_008577  Shewana3_2373  ribonuclease activity regulator protein RraA  47.62 
 
 
164 aa  142  1e-33  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00367036  normal  0.0338555 
 
 
-
 
NC_011662  Tmz1t_1248  ribonuclease activity regulator protein RraA  44.97 
 
 
159 aa  142  2e-33  Thauera sp. MZ1T  Bacteria  normal  0.728506  n/a   
 
 
-
 
NC_008321  Shewmr4_2165  ribonuclease activity regulator protein RraA  46.94 
 
 
164 aa  141  4e-33  Shewanella sp. MR-4  Bacteria  normal  0.0632667  normal  0.880589 
 
 
-
 
NC_008322  Shewmr7_2242  ribonuclease activity regulator protein RraA  46.94 
 
 
164 aa  141  4e-33  Shewanella sp. MR-7  Bacteria  normal  0.132469  normal  0.489263 
 
 
-
 
NC_004578  PSPTO_2294  dimethylmenaquinone methyltransferase family protein  44.3 
 
 
162 aa  140  7e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0136666  n/a   
 
 
-
 
NC_009831  Ssed_1984  ribonuclease activity regulator protein RraA  42.86 
 
 
164 aa  140  8e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0137329  normal  0.331323 
 
 
-
 
NC_009457  VC0395_A1944  ribonuclease activity regulator protein RraA  46.31 
 
 
162 aa  139  9.999999999999999e-33  Vibrio cholerae O395  Bacteria  hitchhiker  0.000472167  n/a   
 
 
-
 
NC_003909  BCE_3327  ribonuclease activity regulator protein RraA  42.28 
 
 
159 aa  139  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2567  ribonuclease activity regulator protein RraA  45.58 
 
 
164 aa  139  1.9999999999999998e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_1772  ribonuclease activity regulator protein RraA  42.95 
 
 
163 aa  139  1.9999999999999998e-32  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000823097  normal 
 
 
-
 
NC_009052  Sbal_1992  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  138  3e-32  Shewanella baltica OS155  Bacteria  normal  0.816132  n/a   
 
 
-
 
NC_011312  VSAL_I2557  ribonuclease activity regulator protein RraA  43.54 
 
 
158 aa  138  3.9999999999999997e-32  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1888  ribonuclease activity regulator protein RraA  47.62 
 
 
164 aa  138  3.9999999999999997e-32  Shewanella amazonensis SB2B  Bacteria  normal  0.059217  normal 
 
 
-
 
NC_010506  Swoo_2615  ribonuclease activity regulator protein RraA  44.22 
 
 
164 aa  137  4.999999999999999e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.78337  normal  0.362905 
 
 
-
 
NC_009665  Shew185_2007  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  137  4.999999999999999e-32  Shewanella baltica OS185  Bacteria  normal  0.151067  n/a   
 
 
-
 
NC_009357  OSTLU_8571  predicted protein  49.62 
 
 
136 aa  137  4.999999999999999e-32  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0694704 
 
 
-
 
NC_008025  Dgeo_0386  ribonuclease activity regulator protein RraA  45.33 
 
 
167 aa  137  6e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_23290  ribonuclease activity regulator protein RraA  44.3 
 
 
162 aa  137  7e-32  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2087  ribonuclease activity regulator protein RraA  42.28 
 
 
162 aa  136  8.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  0.188373  normal  0.130481 
 
 
-
 
NC_011663  Sbal223_2332  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  136  1e-31  Shewanella baltica OS223  Bacteria  hitchhiker  0.00982975  hitchhiker  0.00847233 
 
 
-
 
NC_008740  Maqu_1882  ribonuclease activity regulator protein RraA  42.95 
 
 
159 aa  136  1e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1909  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  135  2e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3012  ribonuclease activity regulator protein RraA  41.61 
 
 
159 aa  135  2e-31  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000537886  n/a   
 
 
-
 
NC_011725  BCB4264_A3321  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  135  2e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2055  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  135  2e-31  Shewanella baltica OS195  Bacteria  normal  0.215493  hitchhiker  0.000558094 
 
 
-
 
NC_013456  VEA_004459  ribonuclease E inhibitor RraA  42.28 
 
 
160 aa  134  3.0000000000000003e-31  Vibrio sp. Ex25  Bacteria  normal  0.0150677  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3047  ribonuclease activity regulator protein RraA  41.61 
 
 
159 aa  135  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0699347  n/a   
 
 
-
 
NC_005957  BT9727_3109  ribonuclease activity regulator protein RraA  41.61 
 
 
159 aa  134  4e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2092  ribonuclease activity regulator protein RraA  40.94 
 
 
162 aa  134  6.0000000000000005e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.763155  hitchhiker  0.00360273 
 
 
-
 
NC_008345  Sfri_2210  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  134  6.0000000000000005e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0538  ribonuclease activity regulator protein RraA  41.5 
 
 
163 aa  134  7.000000000000001e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04832  ribonuclease activity regulator protein RraA  45.64 
 
 
166 aa  133  8e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_41640  ribonuclease activity regulator protein RraA  42.28 
 
 
162 aa  133  8e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1223  ribonuclease activity regulator protein RraA  49.62 
 
 
164 aa  133  9e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.108874  normal  0.104257 
 
 
-
 
NC_002947  PP_2084  ribonuclease activity regulator protein RraA  42.21 
 
 
163 aa  133  9.999999999999999e-31  Pseudomonas putida KT2440  Bacteria  normal  0.0147593  normal  0.0154234 
 
 
-
 
NC_009783  VIBHAR_00936  ribonuclease activity regulator protein RraA  43.24 
 
 
160 aa  133  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3656  ribonuclease activity regulator protein RraA  42.21 
 
 
163 aa  133  9.999999999999999e-31  Pseudomonas putida F1  Bacteria  normal  0.055385  normal  0.888026 
 
 
-
 
NC_011658  BCAH187_A3341  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  133  9.999999999999999e-31  Bacillus cereus AH187  Bacteria  normal  0.0125864  n/a   
 
 
-
 
NC_010322  PputGB1_1595  ribonuclease activity regulator protein RraA  42.21 
 
 
163 aa  132  9.999999999999999e-31  Pseudomonas putida GB-1  Bacteria  normal  0.462955  normal  0.0410006 
 
 
-
 
NC_009656  PSPA7_3534  ribonuclease activity regulator protein RraA  41.61 
 
 
162 aa  132  1.9999999999999998e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.433731  n/a   
 
 
-
 
NC_007347  Reut_A1963  ribonuclease activity regulator protein RraA  46.1 
 
 
165 aa  132  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3341  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  132  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008700  Sama_3200  ribonuclease activity regulator protein RraA  44.3 
 
 
161 aa  132  1.9999999999999998e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1543  ribonuclease activity regulator protein RraA  42.28 
 
 
161 aa  132  1.9999999999999998e-30  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000209525  n/a   
 
 
-
 
NC_005945  BAS3122  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  132  3e-30  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000000380178  n/a   
 
 
-
 
NC_007530  GBAA_3368  ribonuclease activity regulator protein RraA  40.94 
 
 
159 aa  132  3e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1772  ribonuclease activity regulator protein RraA  42.18 
 
 
164 aa  131  3.9999999999999996e-30  Shewanella putrefaciens CN-32  Bacteria  normal  0.0420602  n/a   
 
 
-
 
NC_010501  PputW619_1602  ribonuclease activity regulator protein RraA  40.91 
 
 
163 aa  130  9e-30  Pseudomonas putida W619  Bacteria  normal  0.730491  hitchhiker  0.000000000811326 
 
 
-
 
NC_010681  Bphyt_2492  ribonuclease activity regulator protein RraA  44.59 
 
 
164 aa  129  1.0000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000420166  hitchhiker  0.0053907 
 
 
-
 
NC_009783  VIBHAR_00721  ribonuclease activity regulator protein RraA  44.14 
 
 
175 aa  130  1.0000000000000001e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A2245  ribonuclease activity regulator protein RraA  42.07 
 
 
171 aa  129  1.0000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0465  ribonuclease activity regulator protein RraA  52.05 
 
 
164 aa  129  1.0000000000000001e-29  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001751  ribonuclease E inhibitor RraA  42.76 
 
 
169 aa  129  1.0000000000000001e-29  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00131194  n/a   
 
 
-
 
NC_010682  Rpic_1229  ribonuclease activity regulator protein RraA  46.56 
 
 
165 aa  129  2.0000000000000002e-29  Ralstonia pickettii 12J  Bacteria  normal  0.698827  normal  0.761807 
 
 
-
 
NC_011312  VSAL_I0292  ribonuclease activity regulator protein RraA  42.76 
 
 
165 aa  128  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1292  ribonuclease activity regulator protein RraA  46.56 
 
 
165 aa  129  2.0000000000000002e-29  Ralstonia pickettii 12D  Bacteria  normal  0.0683145  normal  0.12691 
 
 
-
 
NC_007973  Rmet_1382  ribonuclease activity regulator protein RraA  44.96 
 
 
170 aa  129  2.0000000000000002e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.521864 
 
 
-
 
NC_008309  HS_0220  ribonuclease activity regulator protein RraA  42.28 
 
 
166 aa  129  2.0000000000000002e-29  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.0000505209  n/a   
 
 
-
 
NC_004347  SO_4197  ribonuclease activity regulator protein RraA  43.62 
 
 
161 aa  128  4.0000000000000003e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2117  ribonuclease activity regulator protein RraA  44.9 
 
 
164 aa  128  4.0000000000000003e-29  Shewanella loihica PV-4  Bacteria  normal  0.86066  normal 
 
 
-
 
NC_010159  YpAngola_A0110  ribonuclease activity regulator protein RraA  44.3 
 
 
161 aa  128  4.0000000000000003e-29  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_4106  ribonuclease activity regulator protein RraA  44.3 
 
 
161 aa  128  4.0000000000000003e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0110  ribonuclease activity regulator protein RraA  44.3 
 
 
161 aa  128  4.0000000000000003e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0508  ribonuclease activity regulator protein RraA  42.95 
 
 
161 aa  127  5.0000000000000004e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03814  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4056  regulator of ribonuclease activity A  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4464  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5386  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0433  ribonuclease activity regulator protein RraA  42.28 
 
 
161 aa  127  8.000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  0.0304727  hitchhiker  0.000428302 
 
 
-
 
NC_009800  EcHS_A4161  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3893  ribonuclease activity regulator protein RraA  42.28 
 
 
161 aa  127  8.000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  0.0137999  n/a   
 
 
-
 
NC_010658  SbBS512_E4411  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Shigella boydii CDC 3083-94  Bacteria  normal  0.081305  n/a   
 
 
-
 
NC_010498  EcSMS35_4371  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.520292 
 
 
-
 
NC_010468  EcolC_4089  ribonuclease activity regulator protein RraA  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0421  ribonuclease activity regulator protein RraA  42.28 
 
 
161 aa  127  8.000000000000001e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03763  hypothetical protein  45.64 
 
 
161 aa  127  8.000000000000001e-29  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0447  ribonuclease activity regulator protein RraA  42.28 
 
 
161 aa  127  8.000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  0.944116  normal 
 
 
-
 
NC_007969  Pcryo_1665  ribonuclease activity regulator protein RraA  40 
 
 
177 aa  127  9.000000000000001e-29  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0814823 
 
 
-
 
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