Gene YpsIP31758_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0110 
SymbolrraA 
ID5386540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp116415 
End bp116900 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content48% 
IMG OID640863069 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_001399110 
Protein GI153950904 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG ATACTTCCGA TCTCTGTGAC ATCTATCATG AAGAGGTAAA CGTGGTAGAA 
CCACTGTTCT CCAATTTTGG TGGGCGCACT TCATTTGGTG GCAAGATTAC TACCGTAAAA 
TGTTTCGAAG ATAACGGCTT GTTGTTTGAC CTGCTTGAAG AGAATGGTCT TGGCCGTGTC 
TTGGTCGTTG ATGGCGGTGG TTCAGTGCGC CGTGCATTAA TCAATGCTGA GCTAGCCGAA 
TTAGCCTTGA AAAACGAGTG GGAAGGCATT GTTGTTTACG GTGCCGTGCG TCAGGTCGAT 
GACTTGGCCG AGTTGGACAT TGGCATTCAG GCAATGGCCG CAATACCCGT CGGGGCTGCT 
GATGAGGGTG TGGGTGAGAG CGATATCCGT GTTAATTTTG GCGGTGTAAC GTTCTTCTCA 
GGTGACCATC TTTATGCCGA TAACACCGGT ATTATCTTAT CGGAAGATCC CCTGGATATT 
GAATAA
 
Protein sequence
MKYDTSDLCD IYHEEVNVVE PLFSNFGGRT SFGGKITTVK CFEDNGLLFD LLEENGLGRV 
LVVDGGGSVR RALINAELAE LALKNEWEGI VVYGAVRQVD DLAELDIGIQ AMAAIPVGAA 
DEGVGESDIR VNFGGVTFFS GDHLYADNTG IILSEDPLDI E