| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1888 |
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| Symbol | |
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| ID | 4604138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2304369 |
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| End bp | 2304863 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781265 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_927763 |
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| Protein GI | 119775023 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.059217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC TGTTACCGGA TTTGTTTGAT GAGTTTGCCG AACATCTCAC CTTAGTGGCG
GCGCCCTGGC GTCAGTTTGG TGCGAAACGG ATTTTTTACG GACAGGTGGT CACCGTAAGC
TGCTTTGAGG ATAACTCCAG GGTGAAGGAG CTTTTGGCAA CCCCCGGAAT GGGCCGGGTC
CTGGTGGTTG ACGGCGGTGG CTCACAGCGT AAAGCCCTGG TCGGCGACCT GATTGCTCAG
TCAGCTCTGG ACAATGGCTG GGCTGGCATT GTTGTTTACG GTGCCATCAG GGATGTAGGT
ACTCTCGCCA CCTTAAATAT AGGCGTTCAA GCGTTGGGTT CTGTGCCCAT AAAAACTGAA
CGTCGTGGAT TGGGGGACAC AGGTGTTACA CTTAACCTGG TCGGCGTCAC CGTCAATCCC
GGTGACTGGA TATATGCTGA TGACAATGGC ATAGCCGTTT CCCGAGAGGC CTTGCCGATT
ATTGAACAGG ATTAA
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| Protein sequence | MLDLLPDLFD EFAEHLTLVA APWRQFGAKR IFYGQVVTVS CFEDNSRVKE LLATPGMGRV
LVVDGGGSQR KALVGDLIAQ SALDNGWAGI VVYGAIRDVG TLATLNIGVQ ALGSVPIKTE
RRGLGDTGVT LNLVGVTVNP GDWIYADDNG IAVSREALPI IEQD
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