Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1772 |
Symbol | |
ID | 3716609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1971377 |
End bp | 1971868 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | ribonuclease activity regulator protein RraA |
Protein accession | YP_347504 |
Protein GI | 77457999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000823097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATT ACCTTACGCC TGACCTGTGC GACGCCTATC CGGAGCTGGT TCAGGTGCTG GAACCGATGT TCAGCAATTT CGGCGGCCGT GATTCGTTCG GTGGCGAAAT CGTGACCATC AAATGCTTCG AAGACAACTC GCTGGTCAAG GAACAAGCCG AGCTCAAGGG CAACGGCAAG GTGCTGGTGG TCGATGGCGG TGGCTCGCTG CGCTGCGCAC TGCTGGGCGA CATGATCGCC GAGAAAGCCG CGAAAAACGG TTGGGAAGGG CTGGTCATCT ACGGCTGCAT CCGTGATGTG GACGTCATCG CCCAGACCGA TCTTGGCGTG CAGGCCCTGG CCAGCCATCC GAAAAAGACT GAAAAACGCG GTCTCGGCGA CCTCAACGTG CCGGTGACCT TCGCGGGTGT GACCTTCCAT CCCGGTCAGT ACATCTATGC GGACAACAAT GGCGTGATCA TCTCGCCAAG TCCGTTGAAA ATGCCTGAAT AA
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Protein sequence | MNHYLTPDLC DAYPELVQVL EPMFSNFGGR DSFGGEIVTI KCFEDNSLVK EQAELKGNGK VLVVDGGGSL RCALLGDMIA EKAAKNGWEG LVIYGCIRDV DVIAQTDLGV QALASHPKKT EKRGLGDLNV PVTFAGVTFH PGQYIYADNN GVIISPSPLK MPE
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