Gene Pfl01_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1772 
Symbol 
ID3716609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1971377 
End bp1971868 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_347504 
Protein GI77457999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000823097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT ACCTTACGCC TGACCTGTGC GACGCCTATC CGGAGCTGGT TCAGGTGCTG 
GAACCGATGT TCAGCAATTT CGGCGGCCGT GATTCGTTCG GTGGCGAAAT CGTGACCATC
AAATGCTTCG AAGACAACTC GCTGGTCAAG GAACAAGCCG AGCTCAAGGG CAACGGCAAG
GTGCTGGTGG TCGATGGCGG TGGCTCGCTG CGCTGCGCAC TGCTGGGCGA CATGATCGCC
GAGAAAGCCG CGAAAAACGG TTGGGAAGGG CTGGTCATCT ACGGCTGCAT CCGTGATGTG
GACGTCATCG CCCAGACCGA TCTTGGCGTG CAGGCCCTGG CCAGCCATCC GAAAAAGACT
GAAAAACGCG GTCTCGGCGA CCTCAACGTG CCGGTGACCT TCGCGGGTGT GACCTTCCAT
CCCGGTCAGT ACATCTATGC GGACAACAAT GGCGTGATCA TCTCGCCAAG TCCGTTGAAA
ATGCCTGAAT AA
 
Protein sequence
MNHYLTPDLC DAYPELVQVL EPMFSNFGGR DSFGGEIVTI KCFEDNSLVK EQAELKGNGK 
VLVVDGGGSL RCALLGDMIA EKAAKNGWEG LVIYGCIRDV DVIAQTDLGV QALASHPKKT
EKRGLGDLNV PVTFAGVTFH PGQYIYADNN GVIISPSPLK MPE