Gene Sbal223_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0447 
Symbol 
ID7086923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp513162 
End bp513647 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID643459374 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_002356404 
Protein GI217971653 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.944116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA ACACCTCAGA ATTATGTGAC ATGTACTTAG ATGTCGTAGA TGTAGTCGAG 
CCCATGTTCA GTAACTACGG TGGTTGTAGC TCTTTTGGCG GTTCTATTAG CACCATCAAG
TGCTTTGAAG ACAACGGCCT AATCACCGAA GTCCTACAAG AGGATGGTCA AGGTAAAGTC
TTACTCGTTG ATGGCGGTGG CTCATTACGC CGTGCGCTGA TCGATGGTGC TATCGCTGAA
CTTGCGGTTA GCAACAACTG GGAAGGCATT ATCGTTTACG GTTCTGTACG CGATGTGGAT
GCATTGGAAG AGTTAGACAT TGGTATTCAA GCCCTTGCCT CAATTCCAGT GGGTGCTGAT
GGCAATTCAG TGGGCGAAGT GGAAATTCCG GTCAATTTTG GCGGTGTGAC TTTCTTACCC
GGCGATCACA TTTATGCTGA TAACACAGGT GTGATTTTAT CACCTGAACC ACTCGACATT
GAGTAA
 
Protein sequence
MEYNTSELCD MYLDVVDVVE PMFSNYGGCS SFGGSISTIK CFEDNGLITE VLQEDGQGKV 
LLVDGGGSLR RALIDGAIAE LAVSNNWEGI IVYGSVRDVD ALEELDIGIQ ALASIPVGAD
GNSVGEVEIP VNFGGVTFLP GDHIYADNTG VILSPEPLDI E