Gene Daro_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3096 
Symbol 
ID3568493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3335602 
End bp3336093 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637681567 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_286296 
Protein GI71908709 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA AGACCCCTGA CCTGTGCGAT GAATTCGAAT CCGAACTTGG CAAAACCGTT 
CGTGTCGTCA CCCCGATGTT CCAGCGCTAC GGCGGCCGCA CCAGCTTTTC AGGCCAGATC
GTGACGCTGA AGATTTTTGA GGACAACTCG CTGGTCCGCG AAGTTTTCGG CGAAGACGGC
AAAGGCAAGG TCCTGGTCAT TGATGGTGGC GGCTCGCTGC GCTGCGCGCT GGTCGGTGAC
CAGCTGGCCA TTCTGGCCAA CAAGAACGGC TGGGAAGGCG TCGTCGTCTA TGGCTGCATC
CGCGACTCGG GCGATATCAA TGGCATCGAC ATCGGCGTCC GCGCCCTGAA TACCCATCCG
CAGAAAACGC TGAAGAAGGG CGTTGGCGAC AAGAACGTGG CCGTCACCTT CGGCGGGGTC
ACTTTCAACC CGGGTGAATA TCTCTACGCC GACGAAGATG GCGTCCTCGT TTCAGGCAAA
GCGCTGACCT AA
 
Protein sequence
MTFKTPDLCD EFESELGKTV RVVTPMFQRY GGRTSFSGQI VTLKIFEDNS LVREVFGEDG 
KGKVLVIDGG GSLRCALVGD QLAILANKNG WEGVVVYGCI RDSGDINGID IGVRALNTHP
QKTLKKGVGD KNVAVTFGGV TFNPGEYLYA DEDGVLVSGK ALT