More than 300 homologs were found in PanDaTox collection
for query gene Sbal195_2055 on replicon NC_009997
Organism: Shewanella baltica OS195



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009997  Sbal195_2055  ribonuclease activity regulator protein RraA  100 
 
 		 164 aa  332  1e-90  Shewanella baltica OS195  Bacteria  normal  0.215493  hitchhiker  0.000558094 
 
 
-
 
NC_009665  Shew185_2007  ribonuclease activity regulator protein RraA  98.78 
 
 		 164 aa  328  2e-89  Shewanella baltica OS185  Bacteria  normal  0.151067  n/a   
 
 
-
 
NC_011663  Sbal223_2332  ribonuclease activity regulator protein RraA  98.78 
 
 		 164 aa  326  7e-89  Shewanella baltica OS223  Bacteria  hitchhiker  0.00982975  hitchhiker  0.00847233 
 
 
-
 
NC_009052  Sbal_1992  ribonuclease activity regulator protein RraA  98.17 
 
 		 164 aa  324  3e-88  Shewanella baltica OS155  Bacteria  normal  0.816132  n/a   
 
 
-
 
NC_009438  Sputcn32_1772  ribonuclease activity regulator protein RraA  86.59 
 
 		 164 aa  292  1e-78  Shewanella putrefaciens CN-32  Bacteria  normal  0.0420602  n/a   
 
 
-
 
NC_004347  SO_2567  ribonuclease activity regulator protein RraA  81.1 
 
 		 164 aa  283  8e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2165  ribonuclease activity regulator protein RraA  82.93 
 
 		 164 aa  283  9e-76  Shewanella sp. MR-4  Bacteria  normal  0.0632667  normal  0.880589 
 
 
-
 
NC_008322  Shewmr7_2242  ribonuclease activity regulator protein RraA  82.93 
 
 		 164 aa  283  9e-76  Shewanella sp. MR-7  Bacteria  normal  0.132469  normal  0.489263 
 
 
-
 
NC_008577  Shewana3_2373  ribonuclease activity regulator protein RraA  82.32 
 
 		 164 aa  280  7.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00367036  normal  0.0338555 
 
 
-
 
NC_009831  Ssed_1984  ribonuclease activity regulator protein RraA  63.8 
 
 		 164 aa  225  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0137329  normal  0.331323 
 
 
-
 
NC_008345  Sfri_2210  ribonuclease activity regulator protein RraA  63.19 
 
 		 164 aa  223  7e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2615  ribonuclease activity regulator protein RraA  61.35 
 
 		 164 aa  223  8e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  0.78337  normal  0.362905 
 
 
-
 
NC_009092  Shew_2117  ribonuclease activity regulator protein RraA  64.42 
 
 		 164 aa  219  1.9999999999999999e-56  Shewanella loihica PV-4  Bacteria  normal  0.86066  normal  1 
 
 
-
 
NC_009901  Spea_2410  regulator of ribonuclease activity A  62.2 
 
 		 165 aa  208  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.300312  n/a   
 
 
-
 
NC_003910  CPS_0538  ribonuclease activity regulator protein RraA  59.75 
 
 		 163 aa  198  3e-50  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1888  ribonuclease activity regulator protein RraA  60.13 
 
 		 164 aa  195  3e-49  Shewanella amazonensis SB2B  Bacteria  normal  0.059217  normal  1 
 
 
-
 
NC_007954  Sden_2025  ribonuclease activity regulator protein RraA  60.51 
 
 		 177 aa  192  2e-48  Shewanella denitrificans OS217  Bacteria  normal  0.111815  n/a   
 
 
-
 
NC_009656  PSPA7_3534  ribonuclease activity regulator protein RraA  55.97 
 
 		 162 aa  176  1e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  0.433731  n/a   
 
 
-
 
NC_008463  PA14_41640  ribonuclease activity regulator protein RraA  55.97 
 
 		 162 aa  175  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_2071  regulator of ribonuclease activity A  51.27 
 
 		 161 aa  173  8e-43  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A1944  ribonuclease activity regulator protein RraA  50.93 
 
 		 162 aa  170  9e-42  Vibrio cholerae O395  Bacteria  hitchhiker  0.000472167  n/a   
 
 
-
 
NC_010501  PputW619_1602  ribonuclease activity regulator protein RraA  55.77 
 
 		 163 aa  169  2e-41  Pseudomonas putida W619  Bacteria  normal  0.730491  hitchhiker  0.000000000811326 
 
 
-
 
NC_012560  Avin_23290  ribonuclease activity regulator protein RraA  55.13 
 
 		 162 aa  169  2e-41  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00936  ribonuclease activity regulator protein RraA  48.12 
 
 		 160 aa  167  7e-41  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2092  ribonuclease activity regulator protein RraA  53.46 
 
 		 162 aa  167  8e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.763155  hitchhiker  0.00360273 
 
 
-
 
NC_002947  PP_2084  ribonuclease activity regulator protein RraA  55.13 
 
 		 163 aa  166  1e-40  Pseudomonas putida KT2440  Bacteria  normal  0.0147593  normal  0.0154234 
 
 
-
 
NC_007333  Tfu_2727  ribonuclease activity regulator protein RraA  55.19 
 
 		 163 aa  166  1e-40  Thermobifida fusca YX  Bacteria  normal  0.608878  n/a   
 
 
-
 
NC_010322  PputGB1_1595  ribonuclease activity regulator protein RraA  55.13 
 
 		 163 aa  166  1e-40  Pseudomonas putida GB-1  Bacteria  normal  0.462955  normal  0.0410006 
 
 
-
 
NC_009512  Pput_3656  ribonuclease activity regulator protein RraA  55.13 
 
 		 163 aa  166  1e-40  Pseudomonas putida F1  Bacteria  normal  0.055385  normal  0.888026 
 
 
-
 
NC_009439  Pmen_2087  ribonuclease activity regulator protein RraA  53.12 
 
 		 162 aa  165  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.188373  normal  0.130481 
 
 
-
 
NC_013456  VEA_004459  ribonuclease E inhibitor RraA  46.88 
 
 		 160 aa  165  2.9999999999999998e-40  Vibrio sp. Ex25  Bacteria  normal  0.0150677  n/a   
 
 
-
 
NC_007963  Csal_2060  ribonuclease activity regulator protein RraA  54.78 
 
 		 163 aa  165  2.9999999999999998e-40  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.163212  n/a   
 
 
-
 
NC_007492  Pfl01_1772  ribonuclease activity regulator protein RraA  55.48 
 
 		 163 aa  164  4e-40  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000823097  normal  1 
 
 
-
 
NC_007969  Pcryo_1665  ribonuclease activity regulator protein RraA  52.8 
 
 		 177 aa  164  4e-40  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.0814823 
 
 
-
 
NC_009524  PsycPRwf_1638  ribonuclease activity regulator protein RraA  52.8 
 
 		 175 aa  164  4e-40  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.000156979  normal  0.0371486 
 
 
-
 
NC_011312  VSAL_I2557  ribonuclease activity regulator protein RraA  47.13 
 
 		 158 aa  164  5e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_1485  ribonuclease activity regulator protein RraA  52.17 
 
 		 177 aa  162  2.0000000000000002e-39  Psychrobacter arcticus 273-4  Bacteria  normal  0.108799  normal  0.282904 
 
 
-
 
NC_008740  Maqu_1882  ribonuclease activity regulator protein RraA  52.9 
 
 		 159 aa  162  2.0000000000000002e-39  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_2551  ribonuclease activity regulator protein RraA  51.32 
 
 		 161 aa  162  3e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0143021  n/a   
 
 
-
 
NC_004578  PSPTO_2294  dimethylmenaquinone methyltransferase family protein  51.88 
 
 		 162 aa  160  8.000000000000001e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0136666  n/a   
 
 
-
 
NC_014165  Tbis_1638  regulator of ribonuclease activity A  51.32 
 
 		 159 aa  158  3e-38  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.626899 
 
 
-
 
NC_010717  PXO_04832  ribonuclease activity regulator protein RraA  49.68 
 
 		 166 aa  154  4e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1137  regulator of ribonuclease activity A  50 
 
 		 159 aa  154  6e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3096  ribonuclease activity regulator protein RraA  50.63 
 
 		 163 aa  152  2e-36  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_20270  RraA family protein  51.72 
 
 		 155 aa  151  2.9999999999999998e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.295098  normal  1 
 
 
-
 
NC_011992  Dtpsy_1445  ribonuclease activity regulator protein RraA  54.55 
 
 		 168 aa  151  2.9999999999999998e-36  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2372  ribonuclease activity regulator protein RraA  56.2 
 
 		 170 aa  150  1e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.693976  normal  1 
 
 
-
 
NC_008782  Ajs_2403  ribonuclease activity regulator protein RraA  53.85 
 
 		 168 aa  150  1e-35  Acidovorax sp. JS42  Bacteria  normal  0.330498  normal  1 
 
 
-
 
NC_008825  Mpe_A1561  ribonuclease activity regulator protein RraA  52.32 
 
 		 168 aa  149  2e-35  Methylibium petroleiphilum PM1  Bacteria  normal  0.220477  normal  1 
 
 
-
 
NC_007908  Rfer_1955  ribonuclease activity regulator protein RraA  49.38 
 
 		 173 aa  145  3e-34  Rhodoferax ferrireducens T118  Bacteria  normal  0.30554  n/a   
 
 
-
 
NC_013235  Namu_0271  regulator of ribonuclease activity A  47.62 
 
 		 157 aa  144  4.0000000000000006e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1248  ribonuclease activity regulator protein RraA  47.37 
 
 		 159 aa  143  9e-34  Thauera sp. MZ1T  Bacteria  normal  0.728506  n/a   
 
 
-
 
NC_009664  Krad_2492  regulator of ribonuclease activity A  46.94 
 
 		 170 aa  142  3e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_2009  ribonuclease activity regulator protein RraA  49.67 
 
 		 167 aa  141  4e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00664884 
 
 
-
 
NC_013595  Sros_8444  regulator of ribonuclease activity A  47.37 
 
 		 159 aa  141  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_1172  ribonuclease activity regulator protein RraA  48.03 
 
 		 161 aa  141  4e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.837665  normal  0.121951 
 
 
-
 
NC_014210  Ndas_4363  regulator of ribonuclease activity A  48.03 
 
 		 162 aa  140  7e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_00721  ribonuclease activity regulator protein RraA  45.39 
 
 		 175 aa  139  1.9999999999999998e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2622  ribonuclease activity regulator protein RraA  46.41 
 
 		 161 aa  139  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3549  ribonuclease activity regulator protein RraA  44.81 
 
 		 161 aa  139  1.9999999999999998e-32  Shewanella sp. MR-4  Bacteria  decreased coverage  0.00109264  normal  1 
 
 
-
 
NC_008322  Shewmr7_0407  ribonuclease activity regulator protein RraA  44.81 
 
 		 161 aa  139  1.9999999999999998e-32  Shewanella sp. MR-7  Bacteria  decreased coverage  0.000143495  normal  1 
 
 
-
 
NC_008577  Shewana3_3723  ribonuclease activity regulator protein RraA  44.81 
 
 		 161 aa  139  1.9999999999999998e-32  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00679648  normal  1 
 
 
-
 
NC_009357  OSTLU_8571  predicted protein  47.79 
 
 		 136 aa  138  3e-32  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.0694704 
 
 
-
 
NC_006348  BMA1593  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  0.11137  n/a   
 
 
-
 
NC_009074  BURPS668_2477  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000110984  n/a   
 
 
-
 
NC_007434  BURPS1710b_2618  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0127005  n/a   
 
 
-
 
NC_009076  BURPS1106A_2531  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_1368  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0226901  n/a   
 
 
-
 
NC_009438  Sputcn32_0508  ribonuclease activity regulator protein RraA  44.81 
 
 		 161 aa  138  3.9999999999999997e-32  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A3218  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.00155848  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2095  ribonuclease activity regulator protein RraA  46.63 
 
 		 165 aa  138  3.9999999999999997e-32  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.00000569604  n/a   
 
 
-
 
NC_009831  Ssed_4094  ribonuclease activity regulator protein RraA  46.75 
 
 		 161 aa  137  4.999999999999999e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0447  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  137  4.999999999999999e-32  Shewanella baltica OS223  Bacteria  normal  0.944116  normal  1 
 
 
-
 
NC_009997  Sbal195_0433  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  137  4.999999999999999e-32  Shewanella baltica OS195  Bacteria  normal  0.0304727  hitchhiker  0.000428302 
 
 
-
 
NC_009665  Shew185_0421  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  137  4.999999999999999e-32  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3893  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  137  4.999999999999999e-32  Shewanella baltica OS155  Bacteria  normal  0.0137999  n/a   
 
 
-
 
NC_004347  SO_4197  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  137  6e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_3997  ribonuclease activity regulator protein RraA  48.3 
 
 		 176 aa  137  6e-32  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_3296  ribonuclease activity regulator protein RraA  44.74 
 
 		 170 aa  137  6e-32  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  0.234724 
 
 
-
 
NC_007954  Sden_0463  ribonuclease activity regulator protein RraA  46.1 
 
 		 161 aa  136  1e-31  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1124  ribonuclease activity regulator protein RraA  44.9 
 
 		 160 aa  136  1e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.22942  normal  1 
 
 
-
 
NC_013456  VEA_001751  ribonuclease E inhibitor RraA  44.44 
 
 		 169 aa  136  1e-31  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00131194  n/a   
 
 
-
 
NC_009077  Mjls_5435  ribonuclease activity regulator protein RraA  44.22 
 
 		 159 aa  136  1e-31  Mycobacterium sp. JLS  Bacteria  normal  0.89586  normal  0.892268 
 
 
-
 
NC_008146  Mmcs_5056  ribonuclease activity regulator protein RraA  44.9 
 
 		 159 aa  135  2e-31  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_5144  ribonuclease activity regulator protein RraA  44.9 
 
 		 159 aa  135  2e-31  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5682  ribonuclease activity regulator protein RraA  44.9 
 
 		 160 aa  136  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  hitchhiker  0.00219714 
 
 
-
 
NC_008345  Sfri_0477  ribonuclease activity regulator protein RraA  44.81 
 
 		 161 aa  135  3.0000000000000003e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0220  ribonuclease activity regulator protein RraA  40.52 
 
 		 166 aa  134  4e-31  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.0000505209  n/a   
 
 
-
 
NC_009092  Shew_3370  ribonuclease activity regulator protein RraA  44.16 
 
 		 161 aa  134  6.0000000000000005e-31  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007651  BTH_I1992  ribonuclease activity regulator protein RraA  50.35 
 
 		 165 aa  134  6.0000000000000005e-31  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000162446  n/a   
 
 
-
 
NC_008700  Sama_3200  ribonuclease activity regulator protein RraA  42.86 
 
 		 161 aa  134  6.0000000000000005e-31  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I0292  ribonuclease activity regulator protein RraA  42.86 
 
 		 165 aa  134  7.000000000000001e-31  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1963  ribonuclease activity regulator protein RraA  46.41 
 
 		 165 aa  133  9.999999999999999e-31  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_1382  ribonuclease activity regulator protein RraA  47.62 
 
 		 170 aa  133  9.999999999999999e-31  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.521864 
 
 
-
 
NC_009901  Spea_3790  ribonuclease activity regulator protein RraA  42.86 
 
 		 161 aa  132  1.9999999999999998e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0530  ribonuclease activity regulator protein RraA  43.51 
 
 		 161 aa  132  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1354  ribonuclease activity regulator protein RraA  43.9 
 
 		 168 aa  131  3e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.498794  normal  1 
 
 
-
 
NC_010084  Bmul_1223  ribonuclease activity regulator protein RraA  45.57 
 
 		 164 aa  132  3e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.108874  normal  0.104257 
 
 
-
 
NC_010681  Bphyt_2492  ribonuclease activity regulator protein RraA  45.57 
 
 		 164 aa  131  3.9999999999999996e-30  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000420166  hitchhiker  0.0053907 
 
 
-
 
NC_012793  GWCH70_1543  ribonuclease activity regulator protein RraA  46.62 
 
 		 161 aa  131  3.9999999999999996e-30  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000209525  n/a   
 
 
-
 
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