| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5386 |
|---|
| Symbol | rraA |
|---|
| ID | 6967413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 5023450 |
|---|
| End bp | 5023935 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643389040 |
|---|
| Product | ribonuclease activity regulator protein RraA |
|---|
| Protein accession | YP_002273449 |
|---|
| Protein GI | 209397118 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | [TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACG ATACTTCCGA GCTTTGTGAC ATCTATCAAG AAGATGTTAA CGTCGTGGAA
CCGCTGTTCT CCAACTTTGG CGGACGGGCG TCGTTTGGCG GACAAATAAT CACGGTAAAA
TGTTTCGAGG ACAACGGGTT GCTGTACGAT CTGCTCGAAC AGAATGGCCG TGGTCGTGTT
CTTGTCGTCG ATGGCGGTGG TTCTGTTCGT CGCGCACTGG TCGATGCTGA ACTGGCGCGT
CTGGCAGTAC AAAATGAATG GGAAGGTCTG GTCATTTACG GCGCGGTGCG TCAGGTAGAT
GACCTGGAAG AGTTGGATAT CGGCATCCAG GCGATGGCGG CAATTCCGGT TGGTGCCGCT
GGCGAAGGCA TTGGCGAAAG CGATGTCCGC GTCAATTTTG GCGGTGTTAC CTTCTTCTCC
GGCGACCATC TTTATGCCGA CAATACCGGG ATTATTCTTT CAGAAGATCC GCTGGATATT
GAATAA
|
|---|
| Protein sequence | MKYDTSELCD IYQEDVNVVE PLFSNFGGRA SFGGQIITVK CFEDNGLLYD LLEQNGRGRV
LVVDGGGSVR RALVDAELAR LAVQNEWEGL VIYGAVRQVD DLEELDIGIQ AMAAIPVGAA
GEGIGESDVR VNFGGVTFFS GDHLYADNTG IILSEDPLDI E
|
|---|
| |