Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1665 |
Symbol | |
ID | 4034776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2052254 |
End bp | 2052787 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637974130 |
Product | ribonuclease activity regulator protein RraA |
Protein accession | YP_580926 |
Protein GI | 93006489 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0814823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAT CAGTAACAAT GACCAAAGAA AACTTTGTAA CTTGTGATTT ATTAGATGCC AATCCTGAAT CACAGGTATG CCTGCCTAAT ATCGAAGGTA AATCGTTTTA TAGTTTTGGC GGCAAAGACA AATTCTGCGG TGAGATTGTG ACCGTCAAAT GTTTTGAAGA TAATAGTCGC GTCAAATCGT TGCTTAACAA TGATGGTAAA GACAAAGACG GTAATGGCAA GGTGTTGGTC GTTGACGGCG GTGGTTCGAT GCGTTGTGCG CTGTTAGGTG ACATGATTGC ACAGTCGGCT ATTGATAATG GCTGGGCAGG GGTTGTGGTG TATGGCTGTG TTCGTGATGT TGATGATATG GCAGCAATGG ACATCGGGGT AATGGCGCTT GGTTGTATCC CGCGTAAATC AAATCGCCGC GATGAAGGTC AAACCGATCT TGAAATCAGC TTTGGTGATT TAACGCTAAA TTCTGGTATG TTTGTCTACG CAGACAATAA CGGCATTATC GCTAGTGACA AGCCATTAAT TTAA
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Protein sequence | MPESVTMTKE NFVTCDLLDA NPESQVCLPN IEGKSFYSFG GKDKFCGEIV TVKCFEDNSR VKSLLNNDGK DKDGNGKVLV VDGGGSMRCA LLGDMIAQSA IDNGWAGVVV YGCVRDVDDM AAMDIGVMAL GCIPRKSNRR DEGQTDLEIS FGDLTLNSGM FVYADNNGII ASDKPLI
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