Gene Tmz1t_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1248 
Symbol 
ID7085412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1382375 
End bp1382854 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID643698264 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_002354903 
Protein GI217969669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.728506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCC AGACCGCCGA CCTCTGCGAC GCGCACGAGG ACAAGCTCGC CGTCGTCGCC 
CCCATGTTCG CCAGCTACGG CGGCCGCCCG TCCTTCGGTG GACCGATCGC CACGCTGAAG 
ATCTTCGAGG ACAACTCCTT CGTCCGCAAG GCACTGGAAG GACCCGGGAA TGGCCGCGTG 
CTGGTGATCG ACGGCGGCGC CTCGATGCGC TGCGCCCTGG TCGGCGACCA GCTCGCCGAA 
CTCGCGGTGA AGAATGGCTG GGCCGGCATC CTCGTGTACG GCTGCATCCG CGACTCCAAG 
GCGATCGGCG AGATGGACCT CGGCGTCTTC GCCCTCGGCA CCCACCCGAA GAAGACCGTC 
AAGCGCAACG TCGGCGAGGT TGACATCCCG GTGGGCTTCG GCGGCGTCAC CTTCCAGCCC 
GGCCACCACG TCTACGCCGA CGAGGACGGC GTGGTCGTAA GCGCGGAGCC CTTGCTCTGA
 
Protein sequence
MNIQTADLCD AHEDKLAVVA PMFASYGGRP SFGGPIATLK IFEDNSFVRK ALEGPGNGRV 
LVIDGGASMR CALVGDQLAE LAVKNGWAGI LVYGCIRDSK AIGEMDLGVF ALGTHPKKTV 
KRNVGEVDIP VGFGGVTFQP GHHVYADEDG VVVSAEPLL