| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1772 |
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| Symbol | |
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| ID | 5079231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2017839 |
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| End bp | 2018333 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498921 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001183296 |
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| Protein GI | 146292872 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0420602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC TATTACCAGA TTTGTTCGAC CACTACCCTT CAAAACTGAC TTTATTGCCC
TTAGAGTTTA AGGCGTACGG TGGTAAGCGC CTGTTTTGGG GGGAAGTTGT AACGGTAAAA
TGTTTTGAAG ATAACTCTAA AGTGAAGGAA ATATTGGCCC AAGATGGTCA TGGTAAAGTA
CTCGTTGTGG ATGGCGGTGG CTCATCGCGT AGAGCATTAT TAGGCGATCT TATCGCGCAA
AGTGCTTTAG ATCATAGTTG GCAAGGCGTT GTGATTAATG GGTATGTGCG TGATGTTGCT
AGATTGGCGA CCTTTAATCT AGGGGTGAGT GCTCTCGGAG CCATGCCCAT TAAGACTGAA
AAGCTAAATC AAGGACAAAT CAATGTGCCT ATCGACATGG GAGGCGTTAT CGTTAAACCC
GGCATGATGA TTTATGCCGA TGAGAATGGG ATAGCAATCA GCGAGGAGTC GCTAAACTTT
GCTTTTTTAA ATTAA
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| Protein sequence | MLDLLPDLFD HYPSKLTLLP LEFKAYGGKR LFWGEVVTVK CFEDNSKVKE ILAQDGHGKV
LVVDGGGSSR RALLGDLIAQ SALDHSWQGV VINGYVRDVA RLATFNLGVS ALGAMPIKTE
KLNQGQINVP IDMGGVIVKP GMMIYADENG IAISEESLNF AFLN
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