Gene Hhal_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0465 
Symbol 
ID4711524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp533855 
End bp534349 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID639854924 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_001002055 
Protein GI121997268 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC TCACCACCGA TCTTTGTGAT GCCTACGCCG ACGAGCCGGG GGCGCAGCTG 
CGCGCGATGA ACCCGATGCT GATCGGCTAC GGCGGGCGTG CGCGCTTCGG CGGCCCGGTG
ACCACGCTCA AGCTGTTCGA GGATAACGTC CGCGTGCGCG AGCTGCTCAG CGCACCCGGG
GACGGCGGCG TGCTGGTGGT CGACGGCGGC GGGTCCATGC GCTGCGCCCT GCTCGGCGAC
CGACTGGCCG AGCTGGGGCG GGAGAACGGC TGGTCCGGCG CCATCATCTA CGGCTGTGTG
CGCGACAGTG CCGAGCTGGC GCAGATCGAC TTCGGCGTCC AGGCGCTCAA TACGCACCCG
CTCAAGAGTC AGAAGAAGGG GCTCGGGGAG CGCGACGTCT CGGTGACCTT CGCCGGGGTC
ACCATCCAGT CCGGTGACTG GCTCTACGCG GACGAAGACG GCGTGGTGGT GGCGAGCCGC
GAGCTGACGC TCTAG
 
Protein sequence
MALLTTDLCD AYADEPGAQL RAMNPMLIGY GGRARFGGPV TTLKLFEDNV RVRELLSAPG 
DGGVLVVDGG GSMRCALLGD RLAELGRENG WSGAIIYGCV RDSAELAQID FGVQALNTHP
LKSQKKGLGE RDVSVTFAGV TIQSGDWLYA DEDGVVVASR ELTL