Gene VEA_001751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001751 
Symbol 
ID8555380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp138286 
End bp138795 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID646404744 
Productribonuclease E inhibitor RraA 
Protein accessionYP_003284379 
Protein GI262392525 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00131194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA ATACCTCAGC ACTCTGTGAT ATCTACCTCG ATCAGGTAGA TGTGGTTGAA 
CCAATGTTCA GTAATTTTGG CGGTCGCGCT TCATTTGCCG GGCAAATCAC CACCATCAAG 
TGTTTTGAAG ATAATTCGTT GATCCGCGAG ACATTAGAGC AAGATGGACT TGGTCGTGTT 
TTGTTAATTG ACGGTGGCGG TTCCCTACGT AAAGCCCTTA TCGATGCAGA AATCGCAACT 
ATTGCGGAAG AAAGCGAGTG GGAAGGCATT GTCGTTTACG GCTGTGTTCG TGAAGTAGAT 
GAACTTGAAG ATATGAATTT AGGCATTCAA GCCCTCGCTT CTATTCCTGT TGGAGCGACC 
AGTCAGGGTA TTGGCGAATT GGATGTACCA GTCAACTTTG GCGGCGTCAG CTTCTTACCT 
GAAGATTATA TTTATGCTGA TAGCACTGGG ATCATCCTGT CGCCTGAGCC ATTGAATATT 
GATTTAGAGT TGGATGAAGA AGAAGAATAA
 
Protein sequence
MEYNTSALCD IYLDQVDVVE PMFSNFGGRA SFAGQITTIK CFEDNSLIRE TLEQDGLGRV 
LLIDGGGSLR KALIDAEIAT IAEESEWEGI VVYGCVREVD ELEDMNLGIQ ALASIPVGAT 
SQGIGELDVP VNFGGVSFLP EDYIYADSTG IILSPEPLNI DLELDEEEE