Gene HS_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0220 
SymbolrraA 
ID4239735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp221104 
End bp221604 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content39% 
IMG OID638103756 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_718427 
Protein GI113460366 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000505209 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATTG ATACTGCTGA ACTTTGTGAT ATTTACCTCG ATCAAATTGA TGTTGTTGAG 
CCTATTTTTT CCAGTTTTGG CGGCAAAAGC ACATTCTTTG GGAAAATCAC CACAATCAAA 
TGCTTTGAAA ACAATGGATT AATCAGTGAA ATTCTCGAAG AAAATGGCGA AGGTCGAGTG 
CTATTAATTG ATGGTGGCGG TGCGGTTCGC CGTGCATTAA TTGATGCAAA CTTAGCACAA 
TTAGCGGCAG ATAACGGCTG GGAAGGGATT ATCGTATACG GAGCAATTCG TCAATTACAA 
CAATTAGAAA ACATAAATAT CGGCATTCAA GCACTTGCAC CTATCCCTGT CGGTTCAGAT 
GAACAAAGCA TAGGAGAAAC GGACGTTCCG GTAAATTTTG GTGGCGTAAC CTTCTTTCCT 
GATGACTATG TTTATGCAGA TCTTACCGGC ATTATTCTTT CTCAAGAGCC TTTAGATTTA 
GAAGAGTTTG ATAGCTTATA A
 
Protein sequence
MYIDTAELCD IYLDQIDVVE PIFSSFGGKS TFFGKITTIK CFENNGLISE ILEENGEGRV 
LLIDGGGAVR RALIDANLAQ LAADNGWEGI IVYGAIRQLQ QLENINIGIQ ALAPIPVGSD 
EQSIGETDVP VNFGGVTFFP DDYVYADLTG IILSQEPLDL EEFDSL