| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1595 |
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| Symbol | |
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| ID | 5869375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1802994 |
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| End bp | 1803485 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546713 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001667836 |
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| Protein GI | 167032605 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.462955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0410006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATT ACGTAACGCC CGACTTGTGT GACGCCTACC CGGACCTGGT GCAAGTGCTG
GAGCCGATGT TCAGCAATTT CGGCGGCCGC GATTCGTTCG GTGGTCAGAT CGTCACCATC
AAGTGCTTCG AGGACAACTC GCTGGTCAAG GAACAGGTCG AACTTGACGG CAAGGGCAAG
GTGCTGGTGG TCGATGGCGG TGGTTCGCTG CGCCGTGCAC TGCTCGGCGA CATGCTGGCC
GAAAAGGCCG CCAAGAATGG TTGGGAAGGC CTGGTGATCT ACGGTTGCGT GCGTGACGTC
GACGTGTTGA TCCAGACCGA TGTCGGCGTG CAGGCCCTGG CCAGCCACCC AATGAAAACC
GACAAGCGCG GTATCGGCGA CCTCAACGTG GTGGTGGCCT TCGCCGGGGT AACATTCCGC
CCGGGCGAAT ACGTATATGC CGACAACAAT GGTGTTCTGG TATCGCCAAG CCCGCTGGAA
ATGCCGGAGT GA
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| Protein sequence | MQHYVTPDLC DAYPDLVQVL EPMFSNFGGR DSFGGQIVTI KCFEDNSLVK EQVELDGKGK
VLVVDGGGSL RRALLGDMLA EKAAKNGWEG LVIYGCVRDV DVLIQTDVGV QALASHPMKT
DKRGIGDLNV VVAFAGVTFR PGEYVYADNN GVLVSPSPLE MPE
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