| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2087 |
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| Symbol | |
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| ID | 5109821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2314499 |
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| End bp | 2314987 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503331 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001187580 |
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| Protein GI | 146307115 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.188373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.130481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTACA TCACCCCAGA TCTGTGCGAC GCCTATCCGG AGCTGGTCCA GGTGGTCGAG
CCGATGTTCG CCAACTACGG TGGTCGCGAC TCCTTCGGTG GTCAGATGGT GACCATCAAG
TGCCATGAGG ACAATTCGCT GGTAAAGGAA CAGGTCGACC TGCCGGGTGA AGGGCGTGTG
CTGGTCGTCG ATGGCGGCGG CTCGCTGCGC CGGGCGCTGC TGGGCGACAT GCTTGCGGAG
AAGGCTGCCA AGAATGGCTG GGCGGGCATC GTCGTCTATG GCTGCATCCG TGATGTGGAT
GTGATTGCAC AGGCCGATCT GGGCGTGCAG GCGCTGGCCA GCCACCCGAT GAAGACCGAC
AAGCGCGGTA TCGGCGACCT CAACGTGCCG GTCACCTTCG GTGGCGTGAC CTTCAAGCCG
GGCGAGTACC TGTATGCCGA CAACAACGGC ATCATCGTCT CCCCGCAAGC GCTGAGCATG
CCGGAATAA
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| Protein sequence | MHYITPDLCD AYPELVQVVE PMFANYGGRD SFGGQMVTIK CHEDNSLVKE QVDLPGEGRV
LVVDGGGSLR RALLGDMLAE KAAKNGWAGI VVYGCIRDVD VIAQADLGVQ ALASHPMKTD
KRGIGDLNVP VTFGGVTFKP GEYLYADNNG IIVSPQALSM PE
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