Gene Shew185_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0421 
Symbol 
ID5372879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp477934 
End bp478419 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID640828627 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_001364653 
Protein GI152998972 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA ACACCTCAGA ATTATGTGAC ATGTACTTAG ATGTCGTAGA TGTAGTCGAG 
CCCATGTTCA GTAACTACGG TGGTTGTAGC TCTTTTGGCG GTTCTATTAG CACCATCAAG 
TGCTTTGAAG ACAACGGCCT AATCACCGAA GTCCTACAAG AGGATGGTCA AGGTAAAGTC 
TTACTCGTTG ATGGCGGTGG CTCATTACGC CGTGCGCTGA TCGATGGTGC TATCGCTGAA 
CTTGCGGTTA GCAACAACTG GGAAGGCATT ATCGTTTACG GTTCTGTACG CGATGTGGAT 
GCATTGGAAG AGTTAGACAT TGGTATTCAA GCCCTTGCCT CAATTCCAGT GGGTGCTGAT 
GGCAATTCAG TGGGCGAAGT GGAAATTCCG GTCAATTTTG GCGGTGTGAC TTTCTTACCC 
GGCGATCACA TTTATGCTGA TAACACAGGT GTGATTTTAT CACCTGAACC ACTCGACATT 
GAGTAA
 
Protein sequence
MEYNTSELCD MYLDVVDVVE PMFSNYGGCS SFGGSISTIK CFEDNGLITE VLQEDGQGKV 
LLVDGGGSLR RALIDGAIAE LAVSNNWEGI IVYGSVRDVD ALEELDIGIQ ALASIPVGAD 
GNSVGEVEIP VNFGGVTFLP GDHIYADNTG VILSPEPLDI E