Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4371 |
Symbol | rraA |
ID | 6146865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4457710 |
End bp | 4458195 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619192 |
Product | ribonuclease activity regulator protein RraA |
Protein accession | YP_001746316 |
Protein GI | 170684101 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | [TIGR01935] RraA famliy [TIGR02998] regulator of ribonuclease activity A |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.520292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACG ATACTTCCGA GCTTTGTGAC ATCTATCAAG AAGATGTTAA CGTCGTGGAA CCGCTGTTCT CCAACTTTGG CGGACGGGCG TCGTTTGGCG GACAAATAAT CACGGTAAAA TGTTTCGAGG ACAACGGGTT GCTGTACGAT CTGCTCGAAC AGAATGGCCG TGGTCGTGTT CTTGTCGTCG ATGGCGGTGG TTCTGTTCGT CGCGCACTGG TCGATGCTGA ACTGGCGCGT CTGGCAGTAC AAAATGAATG GGAAGGTCTG GTCATTTACG GCGCGGTGCG TCAGGTAGAT GACCTGGAAG AGCTGGATAT CGGCATCCAG GCGATGGCGG CAATTCCGGT TGGTGCCGCT GGCGAAGGCA TTGGCGAAAG CGATGTCCGC GTCAATTTTG GCGGTGTCAC CTTCTTCTCC GGCGACCATC TTTATGCCGA CAATACCGGG ATTATTCTTT CAGAAGATCC GCTGGATATT GAATAA
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Protein sequence | MKYDTSELCD IYQEDVNVVE PLFSNFGGRA SFGGQIITVK CFEDNGLLYD LLEQNGRGRV LVVDGGGSVR RALVDAELAR LAVQNEWEGL VIYGAVRQVD DLEELDIGIQ AMAAIPVGAA GEGIGESDVR VNFGGVTFFS GDHLYADNTG IILSEDPLDI E
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