Gene Avin_23290 details

Gene Information

• Locus tag: Avin_23290
• Symbol: rraA
• ID: 7761245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2326246
• End bp: 2326734
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643805211
• Product: ribonuclease activity regulator protein RraA
• Protein accession: YP_002799492
• Protein GI: 226944419
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase
• TIGRFAM ID: [TIGR01935] RraA famliy

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATACG TCACCCCGGA TCTGTGCGAC GCCTATCCCG AGCTGGTGCA AGTGGTCGAG 
CCGATGTTCA GCAATTTTGG CGGTCGCGAT TCCTTCGGCG GCGAAATCGT CACCATCAAG 
TGTTTCGAAG ACAATTCGCT GGTCAAGGAC CAGGTCGACA CCGATGGCAA GGGCAAAGTG 
CTCGTGGTGG ATGGCGGCGG TTCGTTGCGT CGTGCCTTGC TGGGCGACAT GCTCGCTGAA 
AAGGCTGCCC GCAATGGTTG GGAAGGACTG GTCGTCTACG GTTGCATCCG TGATGTGGAC 
GTGATTGCCC AGACCGACCT GGGAGTCCAG GCCTTGGCTA CCCATCCCAT GAAGACCGAC 
AAGCGGGGCA TCGGCGATCT GAACGTTCCG GTGACTTTCG GTGGCGTCAC TTTCCGGCCA 
GGCGAGTACC TGTATGCCGA CAACAATGGC ATCATCGTGT CTCCACAGCC TCTGAAAATG 
CCGGAATAA 

 

Protein sequence

MQYVTPDLCD AYPELVQVVE PMFSNFGGRD SFGGEIVTIK CFEDNSLVKD QVDTDGKGKV 
LVVDGGGSLR RALLGDMLAE KAARNGWEGL VVYGCIRDVD VIAQTDLGVQ ALATHPMKTD 
KRGIGDLNVP VTFGGVTFRP GEYLYADNNG IIVSPQPLKM PE