| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1382 |
|---|
| Symbol | |
|---|
| ID | 4038185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1491466 |
|---|
| End bp | 1491978 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637976766 |
|---|
| Product | ribonuclease activity regulator protein RraA |
|---|
| Protein accession | YP_583534 |
|---|
| Protein GI | 94310324 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | [TIGR01935] RraA famliy |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.521864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG TTATGAAGCC CGTAACCACC GATATTTGCG ACGCCAATGA AGACCGCCTG
GCCGATGGCT CCCTGCGCGT TCTGACGCCG GGGTTCCTCC ATTTCGGCAA GCGCATGGCC
TTTTCGGGGC CTGCCGTGAC GCTCAAAGTG TTCGAGGACA ACTCAATGGT GCGCGCCACG
CTGGAAACGC CGGGTGCGGG TCGGGTGCTG GTAGTGGATG GGGGTGGTTC GATGCGTTGC
GCGCTGGTTG GCGGGATGCT CGGCGTGCTG GCCGAGAAGA ATGGCTGGGC TGGGATCATC
GTGAACGGCT GCGTGCGGGA TTCGGAAGAG CTCAAGGTGT GCGACGTCGG CATCCGCGCG
CTGGGCGTGC ATCCGCAGAA AAGCCAGAAG CGCAATGTCG GTCAGGAGGA CGTGACCGTG
CAGATGCCGG GTGCGGTCGT GCGGCCGGGC AACTGGATCT ACGCGGACGC CGATGGCGTG
CTGGTCTCCG ACGAGAAGCT GGACGGGGCC TGA
|
|---|
| Protein sequence | MKPVMKPVTT DICDANEDRL ADGSLRVLTP GFLHFGKRMA FSGPAVTLKV FEDNSMVRAT
LETPGAGRVL VVDGGGSMRC ALVGGMLGVL AEKNGWAGII VNGCVRDSEE LKVCDVGIRA
LGVHPQKSQK RNVGQEDVTV QMPGAVVRPG NWIYADADGV LVSDEKLDGA
|
|---|
| |