288 homologs were found in PanDaTox collection
for query gene Arth_3997 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008541  Arth_3997  ribonuclease activity regulator protein RraA  100 
 
 		 176 aa  351  2.9999999999999997e-96  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3776  ribonuclease activity regulator protein RraA  80.92 
 
 		 161 aa  235  2e-61  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013235  Namu_0271  regulator of ribonuclease activity A  62.25 
 
 		 157 aa  195  4.0000000000000005e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_2492  regulator of ribonuclease activity A  57.83 
 
 		 170 aa  186  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8444  regulator of ribonuclease activity A  62.5 
 
 		 159 aa  183  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2727  ribonuclease activity regulator protein RraA  63.09 
 
 		 163 aa  183  1.0000000000000001e-45  Thermobifida fusca YX  Bacteria  normal  0.608878  n/a   
 
 
-
 
NC_014210  Ndas_4363  regulator of ribonuclease activity A  57.96 
 
 		 162 aa  177  4.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1638  regulator of ribonuclease activity A  60.53 
 
 		 159 aa  176  2e-43  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.626899 
 
 
-
 
NC_013159  Svir_20270  RraA family protein  59.06 
 
 		 155 aa  175  3e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.295098  normal  1 
 
 
-
 
NC_013510  Tcur_1137  regulator of ribonuclease activity A  60.4 
 
 		 159 aa  174  6e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1124  ribonuclease activity regulator protein RraA  55.7 
 
 		 160 aa  165  2.9999999999999998e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.22942  normal  1 
 
 
-
 
NC_009565  TBFG_13889  ribonuclease activity regulator protein RraA  53.02 
 
 		 157 aa  164  5.9999999999999996e-40  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_5435  ribonuclease activity regulator protein RraA  55.03 
 
 		 159 aa  164  6.9999999999999995e-40  Mycobacterium sp. JLS  Bacteria  normal  0.89586  normal  0.892268 
 
 
-
 
NC_008146  Mmcs_5056  ribonuclease activity regulator protein RraA  54.36 
 
 		 159 aa  160  9e-39  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_5144  ribonuclease activity regulator protein RraA  54.36 
 
 		 159 aa  160  9e-39  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2551  ribonuclease activity regulator protein RraA  52.35 
 
 		 161 aa  160  1e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0143021  n/a   
 
 
-
 
NC_008726  Mvan_5682  ribonuclease activity regulator protein RraA  53.02 
 
 		 160 aa  159  1e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  hitchhiker  0.00219714 
 
 
-
 
NC_013441  Gbro_0136  regulator of ribonuclease activity A  50.63 
 
 		 166 aa  158  3e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.657064  n/a   
 
 
-
 
NC_014158  Tpau_0114  regulator of ribonuclease activity A  54.55 
 
 		 163 aa  156  1e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.344528  n/a   
 
 
-
 
NC_007963  Csal_2060  ribonuclease activity regulator protein RraA  55.22 
 
 		 163 aa  153  1e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.163212  n/a   
 
 
-
 
NC_008345  Sfri_2210  ribonuclease activity regulator protein RraA  48 
 
 		 164 aa  149  2e-35  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_2117  ribonuclease activity regulator protein RraA  48.67 
 
 		 164 aa  147  8e-35  Shewanella loihica PV-4  Bacteria  normal  0.86066  normal  1 
 
 
-
 
NC_008700  Sama_1888  ribonuclease activity regulator protein RraA  52.67 
 
 		 164 aa  145  3e-34  Shewanella amazonensis SB2B  Bacteria  normal  0.059217  normal  1 
 
 
-
 
NC_008577  Shewana3_2373  ribonuclease activity regulator protein RraA  50.34 
 
 		 164 aa  144  5e-34  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00367036  normal  0.0338555 
 
 
-
 
NC_004347  SO_2567  ribonuclease activity regulator protein RraA  47.33 
 
 		 164 aa  144  6e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2165  ribonuclease activity regulator protein RraA  48 
 
 		 164 aa  142  2e-33  Shewanella sp. MR-4  Bacteria  normal  0.0632667  normal  0.880589 
 
 
-
 
NC_008322  Shewmr7_2242  ribonuclease activity regulator protein RraA  48 
 
 		 164 aa  142  2e-33  Shewanella sp. MR-7  Bacteria  normal  0.132469  normal  0.489263 
 
 
-
 
NC_009831  Ssed_1984  ribonuclease activity regulator protein RraA  47.62 
 
 		 164 aa  141  4e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0137329  normal  0.331323 
 
 
-
 
NC_011662  Tmz1t_1248  ribonuclease activity regulator protein RraA  42.86 
 
 		 159 aa  141  5e-33  Thauera sp. MZ1T  Bacteria  normal  0.728506  n/a   
 
 
-
 
NC_010717  PXO_04832  ribonuclease activity regulator protein RraA  48.37 
 
 		 166 aa  141  6e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2087  ribonuclease activity regulator protein RraA  48.03 
 
 		 162 aa  140  8e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.188373  normal  0.130481 
 
 
-
 
NC_010506  Swoo_2615  ribonuclease activity regulator protein RraA  43.33 
 
 		 164 aa  140  9.999999999999999e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.78337  normal  0.362905 
 
 
-
 
NC_008463  PA14_41640  ribonuclease activity regulator protein RraA  47.37 
 
 		 162 aa  140  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3534  ribonuclease activity regulator protein RraA  47.37 
 
 		 162 aa  139  9.999999999999999e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.433731  n/a   
 
 
-
 
NC_012560  Avin_23290  ribonuclease activity regulator protein RraA  47.37 
 
 		 162 aa  139  1.9999999999999998e-32  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1772  ribonuclease activity regulator protein RraA  47.65 
 
 		 163 aa  139  1.9999999999999998e-32  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000823097  normal  1 
 
 
-
 
NC_009438  Sputcn32_1772  ribonuclease activity regulator protein RraA  47.33 
 
 		 164 aa  139  1.9999999999999998e-32  Shewanella putrefaciens CN-32  Bacteria  normal  0.0420602  n/a   
 
 
-
 
NC_008340  Mlg_1172  ribonuclease activity regulator protein RraA  46.1 
 
 		 161 aa  139  1.9999999999999998e-32  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.837665  normal  0.121951 
 
 
-
 
NC_008740  Maqu_1882  ribonuclease activity regulator protein RraA  43.87 
 
 		 159 aa  139  1.9999999999999998e-32  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1992  ribonuclease activity regulator protein RraA  48.3 
 
 		 164 aa  139  1.9999999999999998e-32  Shewanella baltica OS155  Bacteria  normal  0.816132  n/a   
 
 
-
 
NC_009665  Shew185_2007  ribonuclease activity regulator protein RraA  48.3 
 
 		 164 aa  138  3.9999999999999997e-32  Shewanella baltica OS185  Bacteria  normal  0.151067  n/a   
 
 
-
 
NC_007954  Sden_2025  ribonuclease activity regulator protein RraA  46.31 
 
 		 177 aa  137  6e-32  Shewanella denitrificans OS217  Bacteria  normal  0.111815  n/a   
 
 
-
 
NC_009997  Sbal195_2055  ribonuclease activity regulator protein RraA  48.3 
 
 		 164 aa  137  7e-32  Shewanella baltica OS195  Bacteria  normal  0.215493  hitchhiker  0.000558094 
 
 
-
 
NC_012793  GWCH70_1543  ribonuclease activity regulator protein RraA  48.37 
 
 		 161 aa  136  1e-31  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000209525  n/a   
 
 
-
 
NC_011663  Sbal223_2332  ribonuclease activity regulator protein RraA  47.62 
 
 		 164 aa  135  3.0000000000000003e-31  Shewanella baltica OS223  Bacteria  hitchhiker  0.00982975  hitchhiker  0.00847233 
 
 
-
 
NC_013411  GYMC61_2622  ribonuclease activity regulator protein RraA  47.4 
 
 		 161 aa  134  4e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_2403  ribonuclease activity regulator protein RraA  47.13 
 
 		 168 aa  135  4e-31  Acidovorax sp. JS42  Bacteria  normal  0.330498  normal  1 
 
 
-
 
NC_011992  Dtpsy_1445  ribonuclease activity regulator protein RraA  47.13 
 
 		 168 aa  134  7.000000000000001e-31  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_2294  dimethylmenaquinone methyltransferase family protein  44.3 
 
 		 162 aa  134  9e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0136666  n/a   
 
 
-
 
NC_002947  PP_2084  ribonuclease activity regulator protein RraA  46.31 
 
 		 163 aa  133  9.999999999999999e-31  Pseudomonas putida KT2440  Bacteria  normal  0.0147593  normal  0.0154234 
 
 
-
 
NC_009512  Pput_3656  ribonuclease activity regulator protein RraA  46.31 
 
 		 163 aa  133  9.999999999999999e-31  Pseudomonas putida F1  Bacteria  normal  0.055385  normal  0.888026 
 
 
-
 
NC_007005  Psyr_2092  ribonuclease activity regulator protein RraA  43.62 
 
 		 162 aa  132  1.9999999999999998e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.763155  hitchhiker  0.00360273 
 
 
-
 
NC_010322  PputGB1_1595  ribonuclease activity regulator protein RraA  46.31 
 
 		 163 aa  133  1.9999999999999998e-30  Pseudomonas putida GB-1  Bacteria  normal  0.462955  normal  0.0410006 
 
 
-
 
NC_007973  Rmet_1382  ribonuclease activity regulator protein RraA  44.81 
 
 		 170 aa  132  1.9999999999999998e-30  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.521864 
 
 
-
 
NC_009524  PsycPRwf_1638  ribonuclease activity regulator protein RraA  48.15 
 
 		 175 aa  133  1.9999999999999998e-30  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.000156979  normal  0.0371486 
 
 
-
 
NC_010501  PputW619_1602  ribonuclease activity regulator protein RraA  44.97 
 
 		 163 aa  130  6.999999999999999e-30  Pseudomonas putida W619  Bacteria  normal  0.730491  hitchhiker  0.000000000811326 
 
 
-
 
NC_011312  VSAL_I2557  ribonuclease activity regulator protein RraA  40.67 
 
 		 158 aa  130  6.999999999999999e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1561  ribonuclease activity regulator protein RraA  45.75 
 
 		 168 aa  130  6.999999999999999e-30  Methylibium petroleiphilum PM1  Bacteria  normal  0.220477  normal  1 
 
 
-
 
NC_007298  Daro_3096  ribonuclease activity regulator protein RraA  43.87 
 
 		 163 aa  129  2.0000000000000002e-29  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A1944  ribonuclease activity regulator protein RraA  43.62 
 
 		 162 aa  128  3e-29  Vibrio cholerae O395  Bacteria  hitchhiker  0.000472167  n/a   
 
 
-
 
NC_008025  Dgeo_0386  ribonuclease activity regulator protein RraA  45.51 
 
 		 167 aa  129  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007204  Psyc_1485  ribonuclease activity regulator protein RraA  47.41 
 
 		 177 aa  128  4.0000000000000003e-29  Psychrobacter arcticus 273-4  Bacteria  normal  0.108799  normal  0.282904 
 
 
-
 
NC_007651  BTH_I1992  ribonuclease activity regulator protein RraA  46.1 
 
 		 165 aa  127  7.000000000000001e-29  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000162446  n/a   
 
 
-
 
NC_007969  Pcryo_1665  ribonuclease activity regulator protein RraA  46.67 
 
 		 177 aa  127  7.000000000000001e-29  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.0814823 
 
 
-
 
NC_013456  VEA_004459  ribonuclease E inhibitor RraA  38.16 
 
 		 160 aa  127  9.000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  0.0150677  n/a   
 
 
-
 
NC_003910  CPS_0538  ribonuclease activity regulator protein RraA  43.62 
 
 		 163 aa  127  1.0000000000000001e-28  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_2071  regulator of ribonuclease activity A  43.79 
 
 		 161 aa  127  1.0000000000000001e-28  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2410  regulator of ribonuclease activity A  42.67 
 
 		 165 aa  125  2.0000000000000002e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  0.300312  n/a   
 
 
-
 
NC_009080  BMA10247_1368  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0226901  n/a   
 
 
-
 
NC_006348  BMA1593  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  0.11137  n/a   
 
 
-
 
NC_009074  BURPS668_2477  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000110984  n/a   
 
 
-
 
NC_007434  BURPS1710b_2618  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0127005  n/a   
 
 
-
 
NC_009076  BURPS1106A_2531  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2372  ribonuclease activity regulator protein RraA  46.56 
 
 		 170 aa  125  3e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.693976  normal  1 
 
 
-
 
NC_008785  BMASAVP1_A2095  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.00000569604  n/a   
 
 
-
 
NC_008836  BMA10229_A3218  ribonuclease activity regulator protein RraA  44.16 
 
 		 165 aa  125  3e-28  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.00155848  n/a   
 
 
-
 
NC_009357  OSTLU_8571  predicted protein  44.27 
 
 		 136 aa  125  4.0000000000000003e-28  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.0694704 
 
 
-
 
NC_007347  Reut_A1963  ribonuclease activity regulator protein RraA  43.97 
 
 		 165 aa  124  5e-28  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1955  ribonuclease activity regulator protein RraA  46.76 
 
 		 173 aa  122  2e-27  Rhodoferax ferrireducens T118  Bacteria  normal  0.30554  n/a   
 
 
-
 
NC_010524  Lcho_2009  ribonuclease activity regulator protein RraA  44.87 
 
 		 167 aa  122  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00664884 
 
 
-
 
NC_008345  Sfri_0477  ribonuclease activity regulator protein RraA  40.79 
 
 		 161 aa  122  3e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1292  ribonuclease activity regulator protein RraA  43.57 
 
 		 165 aa  121  5e-27  Ralstonia pickettii 12D  Bacteria  normal  0.0683145  normal  0.12691 
 
 
-
 
NC_010682  Rpic_1229  ribonuclease activity regulator protein RraA  41.14 
 
 		 165 aa  120  7e-27  Ralstonia pickettii 12J  Bacteria  normal  0.698827  normal  0.761807 
 
 
-
 
NC_009092  Shew_3370  ribonuclease activity regulator protein RraA  40.79 
 
 		 161 aa  120  9e-27  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1354  ribonuclease activity regulator protein RraA  43.4 
 
 		 168 aa  119  1.9999999999999998e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  0.498794  normal  1 
 
 
-
 
NC_009783  VIBHAR_00936  ribonuclease activity regulator protein RraA  35.53 
 
 		 160 aa  119  1.9999999999999998e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3615  regulator of ribonuclease activity A  42.95 
 
 		 164 aa  118  3e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.507491  n/a   
 
 
-
 
NC_007954  Sden_0463  ribonuclease activity regulator protein RraA  39.47 
 
 		 161 aa  118  3e-26  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_1223  ribonuclease activity regulator protein RraA  42.86 
 
 		 164 aa  119  3e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.108874  normal  0.104257 
 
 
-
 
NC_009438  Sputcn32_0508  ribonuclease activity regulator protein RraA  39.47 
 
 		 161 aa  118  3.9999999999999996e-26  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_2492  ribonuclease activity regulator protein RraA  42.86 
 
 		 164 aa  118  3.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000420166  hitchhiker  0.0053907 
 
 
-
 
NC_011663  Sbal223_0447  ribonuclease activity regulator protein RraA  38.82 
 
 		 161 aa  117  7e-26  Shewanella baltica OS223  Bacteria  normal  0.944116  normal  1 
 
 
-
 
NC_009052  Sbal_3893  ribonuclease activity regulator protein RraA  38.82 
 
 		 161 aa  117  7e-26  Shewanella baltica OS155  Bacteria  normal  0.0137999  n/a   
 
 
-
 
NC_009997  Sbal195_0433  ribonuclease activity regulator protein RraA  38.82 
 
 		 161 aa  117  7e-26  Shewanella baltica OS195  Bacteria  normal  0.0304727  hitchhiker  0.000428302 
 
 
-
 
NC_009665  Shew185_0421  ribonuclease activity regulator protein RraA  38.82 
 
 		 161 aa  117  7e-26  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3549  ribonuclease activity regulator protein RraA  39.47 
 
 		 161 aa  117  7.999999999999999e-26  Shewanella sp. MR-4  Bacteria  decreased coverage  0.00109264  normal  1 
 
 
-
 
NC_008322  Shewmr7_0407  ribonuclease activity regulator protein RraA  39.47 
 
 		 161 aa  117  7.999999999999999e-26  Shewanella sp. MR-7  Bacteria  decreased coverage  0.000143495  normal  1 
 
 
-
 
NC_008577  Shewana3_3723  ribonuclease activity regulator protein RraA  39.47 
 
 		 161 aa  117  7.999999999999999e-26  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00679648  normal  1 
 
 
-
 
NC_010622  Bphy_1374  ribonuclease activity regulator protein RraA  42.86 
 
 		 164 aa  117  9e-26  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000213066  normal  1 
 
 
-
 
NC_004347  SO_4197  ribonuclease activity regulator protein RraA  38.82 
 
 		 161 aa  117  9.999999999999999e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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