Gene Rpic12D_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1292 
Symbol 
ID8018937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1365837 
End bp1366334 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID644830072 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_002981253 
Protein GI241662893 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0683145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.12691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA TTCCCGTGAC TGATTTGTGC GACATGCACG AAGACAAGCT GGTGTACGGC 
AGCCTGCGTG TGCTCGCGCC GGTGTTCCGC AGCTTTGGCA AGCGCGCTGC ATTTGCCGGC
CCGGCTTCCA CGCTCAAGGT GTTTGAAGAC AACGGCCTGG TACGCGCCGC GCTGGAAGAA
CAGGGCGCGG GCCGCGTGCT GGTGATCGAT GGCGGCGGCT CTTTGCGCTG CGCCCTGGTG
GGCGGCAACC TGGGCAAGCT GGCAGAAGAG AACGGTTGGG AAGGCATTCT GCTCAACGGC
TGCGTGCGCG ATACGCGCGA GCTGGCCGAA TGCAACGTCG GCATCCACGC CCTGGCCGTG
CACCCGCGCA AGAGCATCAA GAAGAACGCC GGGCAGCGCG AAGTCGGCGT GCAGATGCCG
GGCGCGTACA TCCAGTCTGG CGAGTGGATC TATGCCGACG AAGACGGCGT GCTCGTTTCG
CAGGACATGC TCGAATGA
 
Protein sequence
MTMIPVTDLC DMHEDKLVYG SLRVLAPVFR SFGKRAAFAG PASTLKVFED NGLVRAALEE 
QGAGRVLVID GGGSLRCALV GGNLGKLAEE NGWEGILLNG CVRDTRELAE CNVGIHALAV
HPRKSIKKNA GQREVGVQMP GAYIQSGEWI YADEDGVLVS QDMLE