Gene Sbal_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3893 
Symbol 
ID4843116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp4571122 
End bp4571607 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID640121156 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_001052232 
Protein GI126176083 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0137999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA ACACCTCAGA ATTATGTGAC ATGTACTTAG ATGTCGTAGA TGTAGTCGAG 
CCCATGTTCA GTAACTACGG TGGTTGTAGC TCTTTTGGCG GTTCTATTAG CACCATCAAG 
TGCTTTGAAG ACAACGGCCT AATCACCGAA GTCCTACAAG AGGATGGTCA AGGTAAAGTC 
TTACTCGTTG ATGGCGGTGG CTCATTACGC CGTGCGCTGA TCGATGGTGC TATCGCTGAA 
CTTGCGGTTA GCAACAACTG GGAAGGCATT ATCGTTTACG GTTCTGTACG CGATGTGGAT 
GCATTGGAAG AGTTAGACAT TGGTATTCAA GCCCTTGCCT CAATTCCAGT GGGTGCTGAT 
GGCAATTCAG TGGGCGAAGT GGAAATTCCG GTCAATTTTG GCGGTGTGAC CTTCTTACCC 
GGCGATCACA TTTATGCTGA TAACACAGGT GTGATTTTAT CACCTGAACC ACTCGACATT 
GAGTAA
 
Protein sequence
MEYNTSELCD MYLDVVDVVE PMFSNYGGCS SFGGSISTIK CFEDNGLITE VLQEDGQGKV 
LLVDGGGSLR RALIDGAIAE LAVSNNWEGI IVYGSVRDVD ALEELDIGIQ ALASIPVGAD 
GNSVGEVEIP VNFGGVTFLP GDHIYADNTG VILSPEPLDI E