| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2007 |
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| Symbol | |
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| ID | 5370143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2393784 |
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| End bp | 2394278 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640830211 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001366213 |
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| Protein GI | 153000532 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.151067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC TACTACCAGA TTTATTTGAC CACTATCCGT CTAAATTACA GTTACTTCCC
CTCGAATTTA AACCCTATGG CGGTAAGCGG CTCTTTTGGG GCGAGATAGT CACAGTCAAG
TGTTTTGAAG ATAATTCTAA GGTAAAAGAA ATACTTGCAC AGGATGGGCA AGGAAAAGTT
TTGGTTGTCG ATGGGGGCGG TTCTTTGCGC CGCGCATTGT TAGGCGATCT CATTGCGCAA
AGCGCGCTAG ATAATGGCTG GCAAGGGATA GTGATCAATG GTTGTGTTCG TGATGTAGCC
CGATTAAATA CTTTTAATTT AGGTGTTTAT GCCTTAGGTG CCATGCCGAT AAAAACCGAG
AAGTTAGATC AAGGCCAAAT TAATGTTGCT GTAGATATGG GCGGCGTGAT GGTTACGCCC
GGTATGATGC TCTATGCCGA TGAAAATGGT ATTGCAGTAA GTGATGAGAT GTTGAACTTT
GCATTTTTAA ATTAA
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| Protein sequence | MLDLLPDLFD HYPSKLQLLP LEFKPYGGKR LFWGEIVTVK CFEDNSKVKE ILAQDGQGKV
LVVDGGGSLR RALLGDLIAQ SALDNGWQGI VINGCVRDVA RLNTFNLGVY ALGAMPIKTE
KLDQGQINVA VDMGGVMVTP GMMLYADENG IAVSDEMLNF AFLN
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