More than 300 homologs were found in PanDaTox collection
for query gene Meso_1937 on replicon NC_008254
Organism: Chelativorans sp. BNC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008254  Meso_1937  binding-protein-dependent transport systems inner membrane component  100 
 
 
606 aa  1181    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4262  binding-protein-dependent transport systems inner membrane component  43.32 
 
 
593 aa  446  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2367  binding-protein-dependent transport systems inner membrane component  41.83 
 
 
597 aa  426  1e-118  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_4875  binding-protein-dependent transport systems inner membrane component  43.58 
 
 
587 aa  424  1e-117  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.432532 
 
 
-
 
NC_009621  Smed_5471  binding-protein-dependent transport systems inner membrane component  42.25 
 
 
588 aa  425  1e-117  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_7062  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
593 aa  350  5e-95  Burkholderia phymatum STM815  Bacteria  normal  normal  0.156031 
 
 
-
 
NC_011004  Rpal_5130  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
596 aa  309  1.0000000000000001e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4602  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
591 aa  287  5e-76  Paracoccus denitrificans PD1222  Bacteria  normal  0.621124  normal 
 
 
-
 
NC_013922  Nmag_1787  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
669 aa  241  2.9999999999999997e-62  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007948  Bpro_4359  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
591 aa  213  7e-54  Polaromonas sp. JS666  Bacteria  normal  0.184868  normal  0.311507 
 
 
-
 
NC_013739  Cwoe_4944  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
588 aa  189  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0237049  normal  0.467133 
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
272 aa  175  1.9999999999999998e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3735  binding-protein-dependent transport systems inner membrane component  38.15 
 
 
283 aa  175  1.9999999999999998e-42  Sinorhizobium medicae WSM419  Bacteria  normal  0.153195  normal 
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
272 aa  174  2.9999999999999996e-42  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_010087  Bmul_6114  binding-protein-dependent transport systems inner membrane component  38.58 
 
 
294 aa  172  1e-41  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.132934  normal 
 
 
-
 
NC_014165  Tbis_1589  binding-protein-dependent transporter inner membrane component  41.74 
 
 
303 aa  171  5e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0639141 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
278 aa  167  4e-40  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
282 aa  167  5e-40  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  37.78 
 
 
282 aa  167  5e-40  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  37.78 
 
 
282 aa  167  5.9999999999999996e-40  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1862  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
272 aa  166  1.0000000000000001e-39  Chelativorans sp. BNC1  Bacteria  normal  0.148364  n/a   
 
 
-
 
NC_004311  BRA1106  polyamine ABC transporter, permease protein, putative  39.83 
 
 
271 aa  164  3e-39  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0447  binding-protein-dependent transport systems inner membrane component  41.89 
 
 
301 aa  164  3e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6037  binding-protein-dependent transport systems inner membrane component  42.41 
 
 
421 aa  165  3e-39  Burkholderia phymatum STM815  Bacteria  normal  0.356927  normal  0.017991 
 
 
-
 
NC_009439  Pmen_0348  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
302 aa  163  8.000000000000001e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_03950  polyamine transport protein PotH  36.4 
 
 
293 aa  163  9e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7800  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
424 aa  163  1e-38  Burkholderia phymatum STM815  Bacteria  normal  0.370122  normal 
 
 
-
 
NC_010506  Swoo_1133  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
301 aa  162  1e-38  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2373  binding-protein-dependent transport systems inner membrane component  40.97 
 
 
417 aa  162  1e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2210  ABC transporter, membrane spanning protein (polyamine)  41.22 
 
 
294 aa  162  2e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0568314  n/a   
 
 
-
 
NC_009636  Smed_0312  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
303 aa  162  2e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.696873  normal 
 
 
-
 
NC_009654  Mmwyl1_2485  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
283 aa  162  2e-38  Marinomonas sp. MWYL1  Bacteria  normal  0.0734345  normal 
 
 
-
 
NC_009656  PSPA7_0394  polyamine transport protein PotH  35.96 
 
 
303 aa  162  2e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
269 aa  161  3e-38  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_007005  Psyr_4613  binding-protein dependent transport system inner membrane protein  42.08 
 
 
415 aa  161  3e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.993847 
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
269 aa  161  4e-38  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_007951  Bxe_A3471  ABC spermidine/putrescine transporter, innermembrane subunit  41.52 
 
 
417 aa  160  4e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.60984 
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
268 aa  161  4e-38  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
268 aa  160  8e-38  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_011988  Avi_6090  ABC transporter membrane spanning protein (polyamine)  35.81 
 
 
300 aa  160  9e-38  Agrobacterium vitis S4  Bacteria  normal  0.467049  n/a   
 
 
-
 
NC_009485  BBta_2421  putative ABC spermidine/putrescine transporter permease protein  36.63 
 
 
291 aa  160  9e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4001  binding-protein-dependent transport systems inner membrane component  42.29 
 
 
415 aa  160  9e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  40 
 
 
275 aa  159  1e-37  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_004347  SO_1272  polyamine ABC transporter, permease protein  32.13 
 
 
301 aa  159  2e-37  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0564  polyamine ABC transporter, permease protein  41.18 
 
 
415 aa  159  2e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2915  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
416 aa  159  2e-37  Polaromonas sp. JS666  Bacteria  normal  0.187641  normal 
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
275 aa  159  2e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_009621  Smed_6248  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
291 aa  159  2e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.358621 
 
 
-
 
NC_008044  TM1040_2989  binding-protein-dependent transport systems inner membrane component  40.64 
 
 
541 aa  159  2e-37  Ruegeria sp. TM1040  Bacteria  normal  0.263811  normal  0.821949 
 
 
-
 
NC_011662  Tmz1t_0426  binding-protein-dependent transport systems inner membrane component  40.87 
 
 
424 aa  158  3e-37  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
275 aa  157  4e-37  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_009512  Pput_5085  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
306 aa  157  4e-37  Pseudomonas putida F1  Bacteria  normal  0.358799  normal  0.347676 
 
 
-
 
NC_002947  PP_5178  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
306 aa  157  4e-37  Pseudomonas putida KT2440  Bacteria  normal  0.542321  normal 
 
 
-
 
NC_011725  BCB4264_A1338  spermidine/putrescine ABC transporter, permease protein  33.96 
 
 
282 aa  157  4e-37  Bacillus cereus B4264  Bacteria  normal  0.727492  n/a   
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
275 aa  157  4e-37  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  39.07 
 
 
274 aa  157  4e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_008254  Meso_2370  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
274 aa  158  4e-37  Chelativorans sp. BNC1  Bacteria  normal  0.560014  n/a   
 
 
-
 
NC_011772  BCG9842_B4006  spermidine/putrescine ABC transporter, permease protein  33.96 
 
 
282 aa  157  4e-37  Bacillus cereus G9842  Bacteria  normal  0.369906  hitchhiker  0.00000000961653 
 
 
-
 
NC_011368  Rleg2_5590  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
290 aa  157  6e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4994  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
290 aa  157  6e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0595  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
413 aa  157  6e-37  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3095  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
301 aa  157  6e-37  Shewanella sp. ANA-3  Bacteria  normal  0.0587247  normal 
 
 
-
 
NC_010322  PputGB1_5238  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
306 aa  157  7e-37  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5402  binding-protein dependent transport system inner membrane protein  33.48 
 
 
306 aa  157  7e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.434189  decreased coverage  0.000259931 
 
 
-
 
NC_009901  Spea_0948  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
301 aa  157  7e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2916  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
301 aa  156  9e-37  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0057841  normal  0.437411 
 
 
-
 
NC_008322  Shewmr7_2998  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
301 aa  156  9e-37  Shewanella sp. MR-7  Bacteria  normal  0.0768287  normal 
 
 
-
 
NC_011663  Sbal223_3190  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
301 aa  156  1e-36  Shewanella baltica OS223  Bacteria  normal  0.90235  normal  0.0128197 
 
 
-
 
NC_007492  Pfl01_5123  binding-protein dependent transport system inner membrane protein  40.18 
 
 
415 aa  156  1e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0230497  normal  0.706395 
 
 
-
 
NC_009052  Sbal_1110  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
301 aa  156  1e-36  Shewanella baltica OS155  Bacteria  hitchhiker  0.000446726  n/a   
 
 
-
 
NC_007643  Rru_A2045  binding-protein dependent transport system inner membrane protein  34.71 
 
 
275 aa  155  1e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.586316  n/a   
 
 
-
 
NC_009997  Sbal195_1201  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
301 aa  156  1e-36  Shewanella baltica OS195  Bacteria  normal  0.0492814  normal 
 
 
-
 
NC_008688  Pden_5050  binding-protein-dependent transport systems inner membrane component  35.1 
 
 
262 aa  156  1e-36  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0975  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
301 aa  156  1e-36  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0409  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
303 aa  156  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00131035  hitchhiker  0.000000775198 
 
 
-
 
NC_009665  Shew185_1168  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
301 aa  156  1e-36  Shewanella baltica OS185  Bacteria  normal  0.0126623  n/a   
 
 
-
 
NC_012791  Vapar_4698  binding-protein-dependent transport systems inner membrane component  40 
 
 
418 aa  155  2e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1096  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
301 aa  155  2.9999999999999998e-36  Shewanella putrefaciens CN-32  Bacteria  normal  0.0511337  n/a   
 
 
-
 
NC_009439  Pmen_4203  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
284 aa  154  2.9999999999999998e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1200  spermidine/putrescine ABC transporter permease  33.96 
 
 
282 aa  154  4e-36  Bacillus anthracis str. Sterne  Bacteria  normal  0.163674  n/a   
 
 
-
 
NC_007530  GBAA_1298  spermidine/putrescine ABC transporter permease  33.96 
 
 
282 aa  154  4e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1568  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
287 aa  154  4e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.18822  normal 
 
 
-
 
NC_010681  Bphyt_2374  binding-protein-dependent transport systems inner membrane component  34 
 
 
270 aa  154  4e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0447  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
415 aa  154  5.9999999999999996e-36  Pseudomonas putida F1  Bacteria  normal  normal  0.328312 
 
 
-
 
NC_011729  PCC7424_3605  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
295 aa  154  5.9999999999999996e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0391464 
 
 
-
 
NC_008345  Sfri_3007  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
299 aa  154  5.9999999999999996e-36  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.360446  n/a   
 
 
-
 
NC_002947  PP_0413  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
415 aa  154  7e-36  Pseudomonas putida KT2440  Bacteria  normal  0.155483  normal 
 
 
-
 
NC_009485  BBta_2420  putative ABC spermidine/putrescine transporter permease protein  36.17 
 
 
281 aa  153  7e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.814446  normal 
 
 
-
 
NC_012880  Dd703_1788  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
275 aa  153  7e-36  Dickeya dadantii Ech703  Bacteria  normal  0.0709875  n/a   
 
 
-
 
NC_011894  Mnod_3648  binding-protein-dependent transport systems inner membrane component  38.94 
 
 
288 aa  153  8e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0569  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
268 aa  153  8.999999999999999e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0474626  normal 
 
 
-
 
NC_010501  PputW619_4789  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
415 aa  153  1e-35  Pseudomonas putida W619  Bacteria  normal  normal  0.966966 
 
 
-
 
NC_004578  PSPTO_5302  putrescine ABC transporter, permease protein  34.31 
 
 
317 aa  153  1e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0444  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
415 aa  153  1e-35  Pseudomonas putida GB-1  Bacteria  normal  normal  0.382081 
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  32.92 
 
 
269 aa  153  1e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
269 aa  152  1e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_010501  PputW619_0285  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
306 aa  152  2e-35  Pseudomonas putida W619  Bacteria  normal  normal  0.678954 
 
 
-
 
NC_007494  RSP_3517  ABC polyamine/opine transporter, inner membrane subunit  35.38 
 
 
282 aa  152  2e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2046  binding-protein dependent transport system inner membrane protein  37.84 
 
 
406 aa  152  2e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.480866  n/a   
 
 
-
 
NC_009050  Rsph17029_3162  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
282 aa  152  2e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0280655 
 
 
-
 
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