| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6248 |
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| Symbol | |
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| ID | 5320550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1168635 |
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| End bp | 1169510 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777848 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314780 |
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| Protein GI | 150378185 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.358621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATCGC AGACCGAAAC CGGGAGTGGG AGACCGAATT CGCCTGCACA GGTCCGGCGG
CTGACCGACT TTGACCTGAC ATTGCCAGCC CTAGGGCTGC TGATCCTGTT CTTCGTCATG
CCGGTCGCCA TGCTGTTAAC GCGTAGCGTC ACAGAGCCGG TGCCGGGTCT CGGCAACTAT
GCCGAATTGC TGGGCTCATC AACCTACCTG CGAATATTCG CAAACACCTT CATCGTTTCT
AGCCTCGTCA CACTTGTATC GTTGCTGATC GGCTTTCCTG TCGCCTGGGC ACTGGCCATC
ATGCCTAGCC GCGCGGCATC CATTGTGTTC GCCATTCTGC TTCTATCCAT GTGGACGAAC
CTTCTTGCGC GTACTTACGC GTGGATGGTG TTGCTTCAGC GCACAGGTGT CATCAACAAG
ATGCTGCTTG GAATGGGGCT CATCGATACG CCGCTTCCGC TCGTCAACAA TCTGACGGGA
GTGACGATCG GCATGACCTA CATCATGTTG CCCTTCATCA TCCTGCCGCT CTATGGCGTC
ATCCGGAAGA TCGATCCTGC CATCCTGCAG GCGGCTGCTC TTTGTGGCGC CAATCGCTGG
CAGTCGCTCG TGCGCGTGCT GCTGCCGCTC GCAATGCCGG GCATGGCGGC AGGTGCGCTT
ATGGTCTTCG TGATGTCGCT CGGCTACTTC GTTACGCCGG CGCTGCTCGG CGGTACTTCG
AACATGATGC TCGCGGAGCT CATCGCACAG TTCGTCCAGT CTCTCGTCAA CTGGGGCATG
GGCGGCGCCG CGGCCCTGGT GCTTCTGGTC GTCACCCTAG CGCTGTACGC CGTGCAGCTT
CGTTTCTTCG GCACAAACCG GATGGGAGGG CGCTGA
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| Protein sequence | MVSQTETGSG RPNSPAQVRR LTDFDLTLPA LGLLILFFVM PVAMLLTRSV TEPVPGLGNY
AELLGSSTYL RIFANTFIVS SLVTLVSLLI GFPVAWALAI MPSRAASIVF AILLLSMWTN
LLARTYAWMV LLQRTGVINK MLLGMGLIDT PLPLVNNLTG VTIGMTYIML PFIILPLYGV
IRKIDPAILQ AAALCGANRW QSLVRVLLPL AMPGMAAGAL MVFVMSLGYF VTPALLGGTS
NMMLAELIAQ FVQSLVNWGM GGAAALVLLV VTLALYAVQL RFFGTNRMGG R
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