| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0444 |
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| Symbol | |
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| ID | 5868183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 519705 |
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| End bp | 520952 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545525 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001666691 |
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| Protein GI | 167031460 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.382081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTG CAGTGCCCCT AAAAGAAGGC GCAGGTCCAA GTCTCAAGCA GCGCCTCAAA
CACGCCGAGC GGGTCAACCG CTGGAAGGCG CAGGCGTTGA TCGCGCCGTT GGCGCTGTTT
CTTCTGCTGG TGTTCCTGGT GCCGATCGCG GCGCTGCTGT ACAAGAGCGT CGGCAACCCG
GAAGTGGTCG GTGGCTTGCC ACGCACGGTA GACATCATCA CCCAGTGGGA CGGCAAGAGC
CTGCCGGGCG AGGATGTGTA CAAGGCACTG AGCCAGGACC TGGCCGAATC GCGCAAGAAC
CAGACCCTTG GCGACCTTTC CAAGCGCTTG AACATGGAGC TGGCTGGCTA CCGCAGCTTG
TTGACCAAGA CAGCCCGGGC ACTGCCATTC AAGGCTGAGC CTGCCTCTTA CAAAGACGCT
TTGCAGGCCG TTGACGAGCG TTGGGGCGAC CCGGCCTACT GGCAGGCCAT ACGCCGCAAT
ACCAGTTCGG TGACTTCTTT TTACCTGCTG GCCTCTGTCG ACCACCGTAT CGACGACCTT
GGCGAACTGG CCAAGGCCAC CCCGGACCAG GCCATTTACC TGGATATCTT CGCCCGCACC
CTGTGGATGG GTGTGGTGAT TACCGCCATC TGCCTTGTGC TGGCCTATCC GTTGGCCTAC
CTGTTGGCCA ACCTGCCGAC CCGCCAGAGC AACCTGCTGA TGATCTTGGT ACTGCTGCCG
TTCTGGACCT CGATCCTGGT GCGGGTGGCG GCGTGGATCG TGCTGCTGCA GTCGGGCGGC
CTGATCAACA GTGCGCTGAT GGCCATGGGC ATCATCGACC AGCCGCTGGA ACTGGTGTTC
AACCGCACCG GTGTGTACAT CTCCATGGTG CACATTCTGC TGCCGTTCAT GATTCTGCCG
CTGTACAGCG TGATGAAGGG CATTTCGCCC AGCTATATGC GCGCGGCGAT CTCGCTGGGG
TGCCACCCGT TCGCCAGCTT CTGGCGGGTG TACTTCCCGC AGACCTATGC CGGCGTTGGC
GCGGGGTGCC TGCTGGTGTT CATCCTGGCC ATCGGCTACT ACATCACCCC GGCGCTGCTC
GGCAGCCCGA ACGACCAGAT GGTCAGCTAC TTCGTCGCTT TCTATACCAA CACCAGCATC
AACTGGGGCA TGGCCACCGC GCTGGGCGGG CTGCTGCTGC TGGCGACTGT GCTGTTGTAC
TTGATCTATA GCTGGCTGGT CGGCGCCAGC CGCCTGCGCC TGAGCTGA
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| Protein sequence | MAIAVPLKEG AGPSLKQRLK HAERVNRWKA QALIAPLALF LLLVFLVPIA ALLYKSVGNP
EVVGGLPRTV DIITQWDGKS LPGEDVYKAL SQDLAESRKN QTLGDLSKRL NMELAGYRSL
LTKTARALPF KAEPASYKDA LQAVDERWGD PAYWQAIRRN TSSVTSFYLL ASVDHRIDDL
GELAKATPDQ AIYLDIFART LWMGVVITAI CLVLAYPLAY LLANLPTRQS NLLMILVLLP
FWTSILVRVA AWIVLLQSGG LINSALMAMG IIDQPLELVF NRTGVYISMV HILLPFMILP
LYSVMKGISP SYMRAAISLG CHPFASFWRV YFPQTYAGVG AGCLLVFILA IGYYITPALL
GSPNDQMVSY FVAFYTNTSI NWGMATALGG LLLLATVLLY LIYSWLVGAS RLRLS
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