| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1168 |
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| Symbol | |
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| ID | 5372593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1393865 |
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| End bp | 1394770 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640829367 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001365383 |
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| Protein GI | 152999702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0126623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATAC CGACTAAATT AAAGTGGCTC AAAGGCCGCA TTTGGACCAT AGGCATACCC
TATGCTTGGC TGTTATTGTT CTTTGCCTTG CCATTTGCGA TTGTCCTTAA ACTGAGTTTT
TCGACGGCGG CGATTGCGAT CCCACCCTAT GAAGCCACGT TCCAATATGC CGATGATGTG
TTAAATATCT TCCTGCACTT TGGTAACTAT TTGATGTTGC TTGATGATTC GCTGTATTAC
ATGGCGTATC TCAGCTCATT GAAAATGGCG TTAATTTCGA CCATCGGCTG TTTGATTATT
GGCTATCCAA TGGCCTATGC GATTGCCCGT GCGCCAGCGC GTTTGCAAAC CGTATTGCTG
CTGTTAGTCA TGTTGCCTTC TTGGACTTCA TTTTTAATCC GGGTTTACGC TTGGATGGGG
ATCTTAAGTA ACACAGGGAT CATCAACCAT TCGCTGATGT GGCTGGGAAT CATCTCTGAG
CCGTTACAAA TCCTCAATAC CAATATTGCC GTGTATATCG GCATCATCTA TGCGTATTTA
CCTTTTATGA TTTTGCCCTT GTACGCCACC TTAGTGAAAC TCGATATGAG TTTGATTGAA
GCCGCGTCTG ACTTAGGCTC AAGCCGTTTA AATACCTTCT GGAAAATCAC TTTTCCGCTG
TCAAAAAGCG GTGTGATTGC CGGTTCTATG TTGGTGTTTA TTCCTGCCGT GGGTGAGTTT
GTGATCCCTG AGCTACTCGG TGGCCCAGAT TCCTTAATGA TAGGTCGAGT CTTATGGCAA
GAATTCTTCA ATAACCGCGA CTGGCCTGTC GCTTCGTCAC TGGCGATTGT AATGCTGGGC
TTATTGATTA TTCCTATTAC CTTATTCCAT CGCTATCAGG CGCGTAGTTT GGAGAAAGAC
CTATGA
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| Protein sequence | MKIPTKLKWL KGRIWTIGIP YAWLLLFFAL PFAIVLKLSF STAAIAIPPY EATFQYADDV
LNIFLHFGNY LMLLDDSLYY MAYLSSLKMA LISTIGCLII GYPMAYAIAR APARLQTVLL
LLVMLPSWTS FLIRVYAWMG ILSNTGIINH SLMWLGIISE PLQILNTNIA VYIGIIYAYL
PFMILPLYAT LVKLDMSLIE AASDLGSSRL NTFWKITFPL SKSGVIAGSM LVFIPAVGEF
VIPELLGGPD SLMIGRVLWQ EFFNNRDWPV ASSLAIVMLG LLIIPITLFH RYQARSLEKD
L
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