Gene Mnod_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3648 
Symbol 
ID7303154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3742254 
End bp3743120 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content68% 
IMG OID643601318 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002498860 
Protein GI220923558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGG ACAGCGCCGC GATGATCCGG CACGAGAGGC GCGAGCGGCT CCTCGTGCTC 
GCGCTGCTCG CCCCCGCCCT CGCGGTGGTG ACGGTGCTGC TCGTGGTGCC GCTCCTCTGG
CTCGCGGCCC AGTCCGTCTA TGTCGACGGG TTCACGCTCG AGAATTACCA GCGCTTCCTC
ACCGAGGACA TCTATTGGCG CAGCTTCCTG CTGACCTTCC GCATCGCCTT CACCGTCACG
GTCCTGGCGG TGCTGCTCGG CTATCCGGTC GCCTATGCGG CCGCGACCCT GCCGCGACGC
TGGAGTCTCG TCGTCCTCGG CATGGTGATC CTGCCGTTCT GGACCAGCGT GCTGGTGCGC
GCCTATGCCT GGATGGTGCT GCTGCAGCGC CGCGGGCTCG TGAACTCGGC CCTCCAGGCG
CTCGGCCTCA TCGACCAGCC GCTGGCGCTC ATCAACAACG AGTTCGGCAC CGTTCTGGCG
ACGCTGCACA TTCTGCTGCC CTTCATGGTG CTGCCTCTCT ACGCCACCAT GCAGCGCATT
CCCGGCGACC TGATGCTCGC CGGGGCGAGC CTCGGCGGCA GCCCGTTCCA CGTCTTCGTG
CGGGTGTTCC TGCCGCTCTC GATGCCCGGG GTGGTCGCCG GCACGGTCCT GGTCTTCGTG
CTGGCGCTTG GCTTCTACAT CACGCCGGAG CTGCTCGGCG GCGGGCGCAC CTTCATGGTG
TCGATGCTGG TGAGCCGCAA CGTCGAGATC TACAATCAGT GGGGCGCGGC GAGCGCGATC
AGCGTCGTGC TGCTCGTCTG CGTGTCCGTG ATCTTCCTCC TGGCCTCCCG GGTGGTCCCG
GTGGAGCGGA TCATGGGAGC GCGCTGA
 
Protein sequence
MTQDSAAMIR HERRERLLVL ALLAPALAVV TVLLVVPLLW LAAQSVYVDG FTLENYQRFL 
TEDIYWRSFL LTFRIAFTVT VLAVLLGYPV AYAAATLPRR WSLVVLGMVI LPFWTSVLVR
AYAWMVLLQR RGLVNSALQA LGLIDQPLAL INNEFGTVLA TLHILLPFMV LPLYATMQRI
PGDLMLAGAS LGGSPFHVFV RVFLPLSMPG VVAGTVLVFV LALGFYITPE LLGGGRTFMV
SMLVSRNVEI YNQWGAASAI SVVLLVCVSV IFLLASRVVP VERIMGAR