| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4359 |
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| Symbol | |
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| ID | 4012969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4598283 |
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| End bp | 4600058 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637944009 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_551146 |
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| Protein GI | 91790194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I
[COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.184868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.311507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA GCAGTAGGTT CGTAAATTGG GTTGTAAATT GGGCGCGGTT CTTACTGCTG
ACTCCAATAG CCATCTTGCT TCTCCTCGCC TTCGCTCTAC CGTTGCTGGC GATCGTGCCG
GCGGCGTTCG GCGGTGATGC CGCCGGGCGT TTCATACGAA TTTTCGGCAA TCCCGTGTAC
CTAACGGTGA TCTGGACAAC GGTGCGCATT AGCCTGGAAG CCACAGCGAT AACTCTCGTT
GTCTCGTTCC CGCTGGCATG GATCTTGAGC CGGGCGACTG GGGTGAAGGC GCTGCTTCTT
GGGCTGTTGG TGCTGGTTCC CTTCCTGACC AGCGTGATGG TGCGGACGTT TGCTTGGCTG
GCGATCCTCG GACAACGTGG CCTTGTCAAC GCGACGCTTC TCAGCCTGGG GTTGACCTCA
GAGCCGCTCT CGCTTCTGTT CAGCGAACTG GCAGTTGTGC TCGCCCTCGT GCAATGTTCG
ATCCCGATGA TGGTCTTCGC TCTCGTCACC GTCCTCCGGC GCATTGACGG ACGCATTCTC
CTGGCCGCTC ACACGCTCGG GGCCAGCCCG CTGCGCATCT GGTCAGGCGT ACTGATTCCT
CTCGCAATCC GCGGCATCCA ATCCGGCGTT ACCATCATCT TCCTCTTCAC CATGGCGAGC
TTCATCGCGC CGACCTTTCT CGGCAGTCAG CGCCAGCAGA TGCTCGCCCA AGTAGTTCAG
TCGGAAATCG ACATCGGAGC CGACTGGGCT TTGGCCGCGG CACTCGGCAT CACGCTTGCC
CTCATAGCGA CGATCATCGT CACGGCACTC GCCGCGGTAG CGAGATACTT GTCGCGTTGG
CAGCGTCCGG GTTTATTGCC GCTGACTATG CCGCAAGAGC ATGTGGAGCA GGTGGACAAG
TCGCTTCTTC GCAGACCGGT AAAGCTGCTT CCCTCCCGTC TCCACATTCC TGCGGGTTTT
CGCGGCGGCG CGCGATTTGT CGAACCGGTC TATCTGTTGT TCATATCTGC CTATATCCTC
CTTCCGCTGG TCGTGCTCAT TCCTGTGTCG TTCAGCTCGG CAGAGGTTCT CATCTTTCCG
CCACCCGGCT ACTCCTTGCG ATGGTTCGAA ACGATCTTTC ACAGCCAGGA ATGGATTGCG
GCGGCACTGA CCAGCCTTCG GATCGGCGCC GCCGTCTGCG TCGCGACCCT CGTCATCGCC
ACCCTGACGG TTCTTGGCAT TGGTCGCCAT TTCCGTTACC AGGGTGCTGC CGAAGCGCTG
CTGATGTCGC CCTTGACCGT CCCAAGCGTT GTTTTCGCGC TAGGTGCTTA TCTGGCCTTC
TCGCGTGTGG GACTCGTGGA TACCGAGACA GGGATCATCA TTGCTCATAC TGTTTTGATA
TTCCCAATTG TTTACCAGGT CGCGTCGGCA ACATTTAGTT CCATCGACCC TTGGCTGTCC
CTTGCAGCGG CAAGCCTTGG GGCGAATCCT TGGCGCATCT TTCGAACGAT CGTTTTCCCC
TTGCTCCTTC CGGGCCTCGC AATCGGAGCT CTGCTTGCGA TGCTTCTCTC GTTCGATGAA
TCTGTCTCTT CGATCTTTCT CAGCAACCTG TCGGTGAAGA CCTTGCCGAG AAAGTTGTGG
GAAGGCATTC GCTTCAATAC CAGTCCCGAA TCTGCGGCCG TCTCCGTCGT GCTGCTGGGT
GTGACATGCG CCGTGGTCGT TGTCGGCATG GTGGTTGTAC TCAGGCGCCG GAAGAACGCT
CTGTTGCCGG TGCAAGCGCG CCCTGAACCG GTTTGA
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| Protein sequence | MTRSSRFVNW VVNWARFLLL TPIAILLLLA FALPLLAIVP AAFGGDAAGR FIRIFGNPVY
LTVIWTTVRI SLEATAITLV VSFPLAWILS RATGVKALLL GLLVLVPFLT SVMVRTFAWL
AILGQRGLVN ATLLSLGLTS EPLSLLFSEL AVVLALVQCS IPMMVFALVT VLRRIDGRIL
LAAHTLGASP LRIWSGVLIP LAIRGIQSGV TIIFLFTMAS FIAPTFLGSQ RQQMLAQVVQ
SEIDIGADWA LAAALGITLA LIATIIVTAL AAVARYLSRW QRPGLLPLTM PQEHVEQVDK
SLLRRPVKLL PSRLHIPAGF RGGARFVEPV YLLFISAYIL LPLVVLIPVS FSSAEVLIFP
PPGYSLRWFE TIFHSQEWIA AALTSLRIGA AVCVATLVIA TLTVLGIGRH FRYQGAAEAL
LMSPLTVPSV VFALGAYLAF SRVGLVDTET GIIIAHTVLI FPIVYQVASA TFSSIDPWLS
LAAASLGANP WRIFRTIVFP LLLPGLAIGA LLAMLLSFDE SVSSIFLSNL SVKTLPRKLW
EGIRFNTSPE SAAVSVVLLG VTCAVVVVGM VVVLRRRKNA LLPVQARPEP V
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