Gene Rleg2_5590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5590 
Symbol 
ID6978684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1234756 
End bp1235628 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID643394688 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002279506 
Protein GI209547588 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGT TTAGCGATGC CTCCGGCGTA GTTGCGCCCT TGCCGAAGAT ACGCAGGCCA 
ACAGGTTTCA GCGGGGTCGT TCCGGCTTTC GCCTTCGTCG GTATCTTTTT CGTCGTGCCG
GTGGCGATAC TGCTGTTGCG AAGCGTGCTG GAACCCGTGC CGGGTCTGGG AAACTATGCG
CAGCTGATCG GGTCTTCGAC CTATCTCAAG ATTTTCGCCA ACACCTTCAT CGTCTCGGGT
CTCGTCACGG TGATTTCGCT CGTGATCGGT TTTCCCGTCG CCTGGGCGCT GGCGATCATG
CCGGGACGGC TGACCTCGGT GATCTTTGCG ATCCTTTTGC TGTCGATGTG GACCAACCTT
TTGGCCCGCA CCTATGCCTG GATGGTGCTC CTGCAGCGCA CCGGGCTCAT CAACAAGATG
CTGATGGGAA TGGGCCTGAT CGACCAGCCG CTGGCGCTCG TCAACAATCT GACCGGCGTG
ACGATCGGCA TGACCTATAT CATGCTGCCA TTCATCATCC TGCCGCTCTA TGGCGTGATC
AAGAAGATCG ACCCATCGAC CCTGCAGGCG GCCGCCCTTT GCGGCGCCAA CCGCTGGCAA
TGCCTGACGC GGGTCCTGCT GCCCTTGGCG ATGCCCGGCA TGGCGGCCGG CGCCCTGATG
GTCTTCGTCA TGTCGCTTGG TTATTTCGTC ACGCCCTCGC TTCTTGGCGG CACCGCCAAC
ATGATGCTCG CAGAGCTGAT CGCGCAGTTC GTACAATCGC TGGTCAACTG GGGAATGGGC
GGCGCTGCGG CGCTGGTTCT CCTCGTGGTG ACTCTGTCGC TCTATGCCGT GCAGTTGCGT
TTCTTCGGCA ACCAGAACCC GGGAGGGCGT TGA
 
Protein sequence
MSTFSDASGV VAPLPKIRRP TGFSGVVPAF AFVGIFFVVP VAILLLRSVL EPVPGLGNYA 
QLIGSSTYLK IFANTFIVSG LVTVISLVIG FPVAWALAIM PGRLTSVIFA ILLLSMWTNL
LARTYAWMVL LQRTGLINKM LMGMGLIDQP LALVNNLTGV TIGMTYIMLP FIILPLYGVI
KKIDPSTLQA AALCGANRWQ CLTRVLLPLA MPGMAAGALM VFVMSLGYFV TPSLLGGTAN
MMLAELIAQF VQSLVNWGMG GAAALVLLVV TLSLYAVQLR FFGNQNPGGR