Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5590 |
Symbol | |
ID | 6978684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1234756 |
End bp | 1235628 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394688 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002279506 |
Protein GI | 209547588 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACGT TTAGCGATGC CTCCGGCGTA GTTGCGCCCT TGCCGAAGAT ACGCAGGCCA ACAGGTTTCA GCGGGGTCGT TCCGGCTTTC GCCTTCGTCG GTATCTTTTT CGTCGTGCCG GTGGCGATAC TGCTGTTGCG AAGCGTGCTG GAACCCGTGC CGGGTCTGGG AAACTATGCG CAGCTGATCG GGTCTTCGAC CTATCTCAAG ATTTTCGCCA ACACCTTCAT CGTCTCGGGT CTCGTCACGG TGATTTCGCT CGTGATCGGT TTTCCCGTCG CCTGGGCGCT GGCGATCATG CCGGGACGGC TGACCTCGGT GATCTTTGCG ATCCTTTTGC TGTCGATGTG GACCAACCTT TTGGCCCGCA CCTATGCCTG GATGGTGCTC CTGCAGCGCA CCGGGCTCAT CAACAAGATG CTGATGGGAA TGGGCCTGAT CGACCAGCCG CTGGCGCTCG TCAACAATCT GACCGGCGTG ACGATCGGCA TGACCTATAT CATGCTGCCA TTCATCATCC TGCCGCTCTA TGGCGTGATC AAGAAGATCG ACCCATCGAC CCTGCAGGCG GCCGCCCTTT GCGGCGCCAA CCGCTGGCAA TGCCTGACGC GGGTCCTGCT GCCCTTGGCG ATGCCCGGCA TGGCGGCCGG CGCCCTGATG GTCTTCGTCA TGTCGCTTGG TTATTTCGTC ACGCCCTCGC TTCTTGGCGG CACCGCCAAC ATGATGCTCG CAGAGCTGAT CGCGCAGTTC GTACAATCGC TGGTCAACTG GGGAATGGGC GGCGCTGCGG CGCTGGTTCT CCTCGTGGTG ACTCTGTCGC TCTATGCCGT GCAGTTGCGT TTCTTCGGCA ACCAGAACCC GGGAGGGCGT TGA
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Protein sequence | MSTFSDASGV VAPLPKIRRP TGFSGVVPAF AFVGIFFVVP VAILLLRSVL EPVPGLGNYA QLIGSSTYLK IFANTFIVSG LVTVISLVIG FPVAWALAIM PGRLTSVIFA ILLLSMWTNL LARTYAWMVL LQRTGLINKM LMGMGLIDQP LALVNNLTGV TIGMTYIMLP FIILPLYGVI KKIDPSTLQA AALCGANRWQ CLTRVLLPLA MPGMAAGALM VFVMSLGYFV TPSLLGGTAN MMLAELIAQF VQSLVNWGMG GAAALVLLVV TLSLYAVQLR FFGNQNPGGR
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