| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4613 |
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| Symbol | |
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| ID | 3370162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5470555 |
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| End bp | 5471802 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654982 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_237681 |
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| Protein GI | 66047840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.993847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG CCGTGCCCTT GACTGAAGGC GCCAGCCCTA ACTTGAAGCA ACGTCTCGCT
CGCGCCGAGC GGGTCAACCG CTGGAAGGCT CAGGCACTGA TCGCGCCGTT GGTGATTTTC
CTGCTGTTGG TGTTTCTCGT GCCCATCGCT GCGCTGCTTT ACAAGAGCGT CGGCAACCCC
GAAGTCGTGA CGGCGCTGCC GACCACCGTG GTCGAAGTGC AAAAATGGGA TGGTAAAGGG
CTGCCGCCCG AGTCGGTCTA CAAAGCGATG AGCCTGGACC TGGCCGAAAC GCGCAAGAAT
TCCACGCTGG GCGATCTGTC CAAGCGTCTG AACATCGAAC TGGCCGGATA CCGCAGCCTG
CTGAGCAAAA CCGTACGCGC GCTGCCGTTC AAGACTGAGC CGGCCTCTTA TAAAGAAGCA
CTCGAAGCGC TGGACGAGCG TTGGGGCGAC CCGGCCTATT GGCAGGCGGT GCGCCGCAAT
ACCAGCAGCA TCACCCCGTA TTACCTGCTG GCGGCGGTCG ACCATCGTGT CGATGACCTC
GGCGAAATCG CCCCGGCGAC TCCGGACCAG GCGATCTATC TGGACATCTT CGCCCGCACG
TTCTGGATGG GCCTGGTGAT TACCGCGATC TGTCTGGTGC TGGCTTATCC GCTGGCCTAT
CTGCTGGCCA GCCTGCCTGC GCGGCAGAGC AACCTGCTGA TGATTCTGGT GCTGCTGCCG
TTCTGGACCT CGATTCTGGT GCGCGTGGCC GCCTGGATCG TGTTGTTGCA GTCCAGCGGT
CTGATCAACA GTGCGTTGCT GGCGATGGGC ATCATCGACA AGCCGCTCGA ACTGGTTTTC
AACCGGGTAG GGGTGTACAT CTCGATGGTG CACATCATGC TGCCGTTCAT GATCCTGCCG
ATCTACAGCG TGATGAAGAA CATTTCCCCG ACCTACATGC GCGCGGCGAT TTCGCTGGGT
TGCCACCCGT TTGCGAGCTT CTGGCGCGTG TACTTCCCGC AGACCTACGC CGGGATCGGT
GCCGGCTGTC TGCTGGTGTT CATTCTGTCG ATCGGCTACT ACATCACCCC GGCGTTGCTG
GGCAGCCCGA ACGATCAGAT GGTCAGCTAT TTCGTCGCGT TCTACACCAA CACCAGCATC
AACTGGGGCA TGGCCACCGC GCTTGGCGGG CTGCTGCTGT TGGCGACCAT CGTGCTGTAC
CTGATTTATA GCTGGCTGGT CGGCGCCAGC CGCCTGCGTC TGAGCTAA
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| Protein sequence | MAIAVPLTEG ASPNLKQRLA RAERVNRWKA QALIAPLVIF LLLVFLVPIA ALLYKSVGNP
EVVTALPTTV VEVQKWDGKG LPPESVYKAM SLDLAETRKN STLGDLSKRL NIELAGYRSL
LSKTVRALPF KTEPASYKEA LEALDERWGD PAYWQAVRRN TSSITPYYLL AAVDHRVDDL
GEIAPATPDQ AIYLDIFART FWMGLVITAI CLVLAYPLAY LLASLPARQS NLLMILVLLP
FWTSILVRVA AWIVLLQSSG LINSALLAMG IIDKPLELVF NRVGVYISMV HIMLPFMILP
IYSVMKNISP TYMRAAISLG CHPFASFWRV YFPQTYAGIG AGCLLVFILS IGYYITPALL
GSPNDQMVSY FVAFYTNTSI NWGMATALGG LLLLATIVLY LIYSWLVGAS RLRLS
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