Gene Meso_1937 details

Gene Information

• Locus tag: Meso_1937
• ID: 4181945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: -
• Start bp: 2074453
• End bp: 2076273
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 638067833
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_674495
• Protein GI: 110634287
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1176] ABC-type spermidine/putrescine transport system, permease component I; [COG1177] ABC-type spermidine/putrescine transport system, permease component II

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTTG CTCGCTCGCA GGGGGGGCTA GTTGCAGGAG TGGGGCGTGG CGAACAGTTG 
AACCTACGTT CATTTCGCAA TCGCCCGGCC CTCTCTCTGC TTCCGCTTGT TCCCGCCTGG 
GTATTTCTGC TCCTCTTCTT TGCGCTGCCG CTGATCTTCG TTACCGGCGC CAGCATCTTC 
GATGAGAGTG GAGCGCTTTC GCTGCAGAAC TTTGTCCGGC TTGTGGAAAC GCCGGTCTAT 
TGGCGCATTC TCCTCAACAC TCTGGACATT GCGTTCTGGA CGGCCTGTAT CACGGTCGTA 
GTCGGTTATC CGCTGGCGCG CATGCTGGCT TCCGGGGAGC GCAGTGGCAC CAGTTTTTTG 
ATGATCGCCA TCATGGTTCC GCTCTGGACC AGCTTTCTCG TTCGCGCGCT GGCCTGGATG 
CTGGTCTTGT CCAGATATGG TGTCATCAAC AGCACGATGC TGTCTCTCGG TTTGCTCGAT 
ACGCCGGCGC GGCTGGTTAA TAATTACCCA GCGGTGCTGC TGGCGATGGT GCACGGCATG 
CTGCCCCTGG CCGTGCTGAC GATGTATTCG GTTATGCAGA ACATCGACCC GGCCCTGTCT 
CGGGCAGCTT CGACGCTTGG TGCCCGCTCT GGCAATGCGT TCTGGCGAGT CTACTTCCCT 
CTGTCGCTGC CAGGGGTGGC TTCAGCTTGG CTCGTCGTCT TCGTTTCTGC ACTCGGAACC 
TTCATCGTGC CGGTCCTGCT TGGTAGTCCG CGTGAAATGA TGATCGCCGG CTCCATCGTC 
GAGCAGATCA ACAATAACTT TAATTGGGGC TTTGCGGGCG CCCTGACAGT GATGCTGTTA 
GGGGCAACCC TCCTCGTTTA TCTCGTTTTT GAAAGAACCC TAGGTAGCTC AGTTTTATCA 
GGCGGCGCCG TGAGTGCGGC AACGGGCAGC GGTCGCAGTG GACGCATCCA GCAAAGGATC 
AGGCCGCTTG GTGGTCGTAT TCTCGCCTTT GTTGGCGCAG TGACGGTCCA TTTCGAGAAG 
ATCCTCGATT CGATATTGGG TCAGCGACAG GCCGGAAGCG GCTTACTCCT GAAAATCACG 
GCCTGGCTGC TGGTCGCCTT CCTGATCCTG CCAGTCGTCT TCGTGATCCC GGTTTCTTTC 
TCGGAAGATC GCTTCTTCAG TTGGCCGCCA GTCGGATTCA CGACGGAATG GTTTGCAACG 
TATTTCACCT CGACGGTGTG GATGCAAGCA ACTCTCAATT CCGTGCTGTT CGCTTTTGTC 
TCGGCTATCG CATCGATGGT GATTGGTATT CCTGCCGCGT TGGTGCTGGC ACGTAGAAGC 
GTACCAATGC GGGCGCTGCT GATGATGCTG GTTCTGATGC CGATCGTGCT GCCGAATGTT 
ATCGTGGCAG TCGGGCTGTT CTATATCTTT GCCTATGTAA ACATGGTGGG AACCATTTGG 
GCGATCATCA TCGGCCATAC AGTTCTCAAT CTTCCCTATG TGATCATCAC TGTCATGGCG 
GTGCTCAAGA ACTATGACGT CCGTCTAGAT CACGCCAGCT GGACCCTCGG CGCTGGAAAG 
CTGCAAACCT TCCGCTTGGT GACGATGCCA ATCTTGAGAG CAGGCATCAC AGCAGCGTTC 
CTCTTTGCCT TCGTACGCTC CTTTGACGAT CTCTCGATTG TTCTCTTTCT CGGAGCAGGA 
CAGCTTAGCA CGCTACCTTT GCAGCTATGG TCTACTGCCC TGGTCGGTAT TGATTCAACC 
CTCGCGGCAG TATCGACGGT CATTTTCGGG GCTGTTTGCA TTGTAGTGAT TGTGGCAATC 
CGCATCGGAT CAAAAAAATA G 

 

Protein sequence

MSVARSQGGL VAGVGRGEQL NLRSFRNRPA LSLLPLVPAW VFLLLFFALP LIFVTGASIF 
DESGALSLQN FVRLVETPVY WRILLNTLDI AFWTACITVV VGYPLARMLA SGERSGTSFL 
MIAIMVPLWT SFLVRALAWM LVLSRYGVIN STMLSLGLLD TPARLVNNYP AVLLAMVHGM 
LPLAVLTMYS VMQNIDPALS RAASTLGARS GNAFWRVYFP LSLPGVASAW LVVFVSALGT 
FIVPVLLGSP REMMIAGSIV EQINNNFNWG FAGALTVMLL GATLLVYLVF ERTLGSSVLS 
GGAVSAATGS GRSGRIQQRI RPLGGRILAF VGAVTVHFEK ILDSILGQRQ AGSGLLLKIT 
AWLLVAFLIL PVVFVIPVSF SEDRFFSWPP VGFTTEWFAT YFTSTVWMQA TLNSVLFAFV 
SAIASMVIGI PAALVLARRS VPMRALLMML VLMPIVLPNV IVAVGLFYIF AYVNMVGTIW 
AIIIGHTVLN LPYVIITVMA VLKNYDVRLD HASWTLGAGK LQTFRLVTMP ILRAGITAAF 
LFAFVRSFDD LSIVLFLGAG QLSTLPLQLW STALVGIDST LAAVSTVIFG AVCIVVIVAI 
RIGSKK