| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5302 |
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| Symbol | potH |
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| ID | 1186987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6028716 |
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| End bp | 6029669 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396621 |
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| Product | putrescine ABC transporter, permease protein |
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| Protein accession | NP_795033 |
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| Protein GI | 28872414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAAGAC GACAGCGGCG TGGTACTGCG CTCATGAAAA TACGCAAGAT CAAGCGCGCT
TTCGAGCGCA TAAAACCCAC CGGGCGGCAG ATGGTCATCG GTGTGCCGTT CCTCTGGCTA
TTCCTGTTCT TTGCCTTGCC GTTTTTGATT GTGCTCAAGA TCAGCTTCGC CGAAGCCGAC
GTCGCGATCC CGCCGTACAC CGAGATCTTC AGTTACGCCG ACGAAAAGCT GCAAATGGCC
CTGAATTTCG CCAACTACAC CTTGCTCAGC GGCGATGATC TGTACGTTTC GGCGTACCTG
GGTTCGCTGA AAATGGCGTT TATCAGCACC GCGCTATGCC TGCTGATCGG CTACCCGATG
GCCTACGCCA TCGCCAGCGC CCGCAAGGAC CTGCAGACCG TGCTGTTGCT GCTGATCATG
ATGCCGACCT GGACCGCGAT CCTGATTCGC GTGTATGCGT GGATGGGTAT TCTCAGCAAC
AACGGCCTGC TCAACGCCTT TCTGATGTGG CTGGGCCTGA TCGACGCGCC GTTGCAGATC
CTCAATACCA ACCTGGCGGT GTACATCGGC GTGGTCTATT CCTACCTGCC GTTCATGATC
CTGCCGCTCT ATGCCAACCT CGTGAAGCAC GACACCAGCC TGCTGGAAGC CGCGTCCGAC
CTGGGCTCCA GCACCTTCAA CAGCTTCTGG AAAATCACCG TGCCGCTGTC CAAGAACGGC
GTGATCGCTG GCTGCATGCT GGTGTTTATC CCGGTGGTGG GCGAGTTCGT GATCCCCGAA
CTGCTCGGTG GCCCGGAAAC CCTGATGATC GGCCGTGTGC TGTGGCAGGA ATTCTTCAAC
AACCGTGACT GGCCGGTGGC TTCGGCACTG GCGGTCATCA TGCTGCTGGT GCTGATCGTG
CCCATTATTC TGTTCAACCG CAGTCAGGCC AAAGAGCTGG AGGGCAAGGC ATGA
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| Protein sequence | MGRRQRRGTA LMKIRKIKRA FERIKPTGRQ MVIGVPFLWL FLFFALPFLI VLKISFAEAD
VAIPPYTEIF SYADEKLQMA LNFANYTLLS GDDLYVSAYL GSLKMAFIST ALCLLIGYPM
AYAIASARKD LQTVLLLLIM MPTWTAILIR VYAWMGILSN NGLLNAFLMW LGLIDAPLQI
LNTNLAVYIG VVYSYLPFMI LPLYANLVKH DTSLLEAASD LGSSTFNSFW KITVPLSKNG
VIAGCMLVFI PVVGEFVIPE LLGGPETLMI GRVLWQEFFN NRDWPVASAL AVIMLLVLIV
PIILFNRSQA KELEGKA
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