| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1133 |
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| Symbol | |
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| ID | 6115367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1456191 |
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| End bp | 1457096 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632616 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001759521 |
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| Protein GI | 170725495 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC CACTCACGTT TAAACTGCCC AAGGGGCAAT GCTGGACCAT AGGGGTTCCC
TATTTCTGGC TACTGTTATT CTTCGCACTT CCCTTTGCTA TTGTCCTTAA GATCAGTCTG
TCGACAGCAG CCATCTCTAT TCCACCTTAT GAATCGCTAT TTAACTATGC CGATGAGTCG
CTGCAGATCT TGCTGAACTT AGGCAATTAT CTGCTGATCT TCGATGACTC GCTCTACTTG
TACGCTTACT TAGGCTCATT GAAGATGGCC TTTATCACCA CCTTAGGCTG CCTCTTGATT
GGTTATCCGA TGGCCTACGC CATTGCCAGA GCGCCTAAGG AGAAGCAGAC CTTGTTGATT
CTGTTGGTGA TGCTACCTTC ATGGACTTCG TTTCTTATTC GTGTGTACGC CTGGATGGGG
ATCTTGAGTA ACAATGGGGT CATTAATAAT ATTCTGCTCT GGTCTGGTGT TATCTCTGAG
CCAATCCAGA TGCTGAATAC CAATTTTGCC GTCTATATCG GGATTATCTA CAGTTACCTG
CCGTTTATGA TTCTACCTCT CTATGCGACC TTGTCTCAAC TCGATGGCAG CTTGCTTGAG
GCTGCATCAG ATTTAGGCTC ACGCTCCCTA AATACCTTCT GGAAAATCAC GCTGCCTCTT
TCTAAAGGTG GGGTGATAGC TGGCTCTATG TTGGTGTTTA TCCCTGTGGT GGGTGAGTTT
GTGATCCCTG AGTTACTGGG TGGTCCAGAT TCTCTGATGA TAGGTAAAGT ACTGTGGCAG
GAGTTCTTCA ATAACCGAGA TTGGCCTGTG GCCTCTGCAC TGGCGATTGT GATGTTAGGT
TTGCTGATTA TCCCTATCAC TCTATTCCAT CGTTACCAAT CTAGAAGCAT GGAGAAAGAG
GTATGA
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| Protein sequence | MKKPLTFKLP KGQCWTIGVP YFWLLLFFAL PFAIVLKISL STAAISIPPY ESLFNYADES
LQILLNLGNY LLIFDDSLYL YAYLGSLKMA FITTLGCLLI GYPMAYAIAR APKEKQTLLI
LLVMLPSWTS FLIRVYAWMG ILSNNGVINN ILLWSGVISE PIQMLNTNFA VYIGIIYSYL
PFMILPLYAT LSQLDGSLLE AASDLGSRSL NTFWKITLPL SKGGVIAGSM LVFIPVVGEF
VIPELLGGPD SLMIGKVLWQ EFFNNRDWPV ASALAIVMLG LLIIPITLFH RYQSRSMEKE
V
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