| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4602 |
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| Symbol | |
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| ID | 4583107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 85154 |
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| End bp | 86929 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771908 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_918361 |
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| Protein GI | 119387327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I
[COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.621124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CGACCCTTGC CGCCTCCCGC ACGCCCCTGG CACAGCGGCT GAAAAGCCCG
GTGCTGCTGC TGGTGCCGGC GGTGCTGTTC CTGGCGGTGA TCTACCTGCT GCCGCTGATC
GACCTGTTCC GGGTCAGCAT GTCCGGCCCG ACCTGGTCCA CGCATTTCGA GCGGGTGTTC
TCGGTTCCAC TTTACTGGGA ATCGCTGATC CGCACCATGC AGATTGCCTT TACGGTGGCC
TGCCTCTGCG CGCTGCTGGG CTATCCCACG GCGCTGCTGA TCCATCGCAC GCGCGGCATC
GCCCAGATCC TGATCGCGAC GGCGGTGGTC CTGCCCTATT TCATCGCCAT CCTGATCCGC
ACCTATGCCT GGATGGTGCT GCTGGGGCGC AACGGCCCGA TCAACAAGCT GCTGCAAACG
CTGGGGCTGA TCGACACGCC GCTGGCGCTG CTGTTCAACC GGGGCTCGGT GCTCTTGGGC
ATGACGGCGG TGCTGTTGCC GCTGATGGTG CTCAGCATCT ATGCCTCGGT GGCGCGGCTG
GACACCAGCC TGACGCGCGC GGCGCTGGCC TCGGGCGCGG GGCCGCTGGC GGTGTTCTGG
CGCGTGCTGC TGCCGCTGAC GCTGCCGGGG ATCGGCGCGG GTTTCCTGCT GGTCTTCGTG
GCCGGGCTGG GGTTTTTCAT CACGCCGACG CTGCTGGGCG GTCCGGGGGA CCAGATGTTC
GCCATGCACA TCACCCAGCA GGCCGATTCC ATTACCGGCG AGGGTTTCTT GCAGGCCCTT
GCCGTGGTGC TGCTGGTCAT CACCCTGGTC GTGGTCGGCA TCGCCGGCCG GATCATGGGG
TTCGAGTTCA TCTGGGGCGG CGGCAAGCTG GGCGATGGCA AGCCCAGGCC CGTCGCCACG
GCAGCCCGCG TGCAGGCGCC GCGCCGGGGG TTCGGCATGG TGCTGGCCGA TCTGCTGGGC
TGGCCGCTGT TGCGGCTGAT GGGGCTGCTG TCCGCCGGCT GGGGACGCTG GACGGTGCGG
ATCATGGGCG GGGCGGTGAT CGTCGCGCTG GTCGTGCCGA TCATCGTCGT CATGGTGATT
TCCTTCAGCA AGGCCAGCTA CCTGACCTTT CCGCCGCCCG CCTGGTCGCT GCGCTGGTAC
GAGAAATTCT TCAGCGACAG CAACTGGATG AACGCTTTCC GCAACTCGCT GCTGATCGCC
CTGCTTTCGG CGACGATCTC GGTCAGCCTG GGCGCGACGG CGGCCATGGG CATCGTGCGC
AGCAATATCC GCTACAAATC CGCGCTGATG CTCTTGCTGG TCAGCCCGAT GATCGTGCCG
CCGGTGGTGT TGGGCCTGTC GCTTTACGCG CTGTTCCTGA AGCTGGGGCT GGTCGGCACC
TATCTCGGCC TGGCCGCCGC CCATGCCATC GGCGGCATCC CGATCGTGGT GGTGATCGTC
GCGGCGTCGC TGCAGGCGGT GGACCAGCGG CTGGAGCAGG GGGCCGCGGT GCATGGCGCC
TCGCCGCTGA CGGTGTTCCG CACGGTGACG CTGCCCGCCA TCGCGCCGGG CCTGGCGGCG
GCGGTGTTCT TTGCCTTCCT GCATTCGTTC GACGAACTGG TGCTGTCGCT GTTCCTGTCC
AGTCCGCGGA TGAAGACCCT GCCGCTGATG CTGTGGGCGG ACATCAACTA TCAGCTGAAC
CCGGTTCTGG CCGTCGTCTC GACGCTGGAG GTGCTGCTGG TCGTGGGCGG GATCATCCTG
GCCCGGCCGG TCCTGACACG CGGCAAGCCC GCGTAA
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| Protein sequence | MSDATLAASR TPLAQRLKSP VLLLVPAVLF LAVIYLLPLI DLFRVSMSGP TWSTHFERVF
SVPLYWESLI RTMQIAFTVA CLCALLGYPT ALLIHRTRGI AQILIATAVV LPYFIAILIR
TYAWMVLLGR NGPINKLLQT LGLIDTPLAL LFNRGSVLLG MTAVLLPLMV LSIYASVARL
DTSLTRAALA SGAGPLAVFW RVLLPLTLPG IGAGFLLVFV AGLGFFITPT LLGGPGDQMF
AMHITQQADS ITGEGFLQAL AVVLLVITLV VVGIAGRIMG FEFIWGGGKL GDGKPRPVAT
AARVQAPRRG FGMVLADLLG WPLLRLMGLL SAGWGRWTVR IMGGAVIVAL VVPIIVVMVI
SFSKASYLTF PPPAWSLRWY EKFFSDSNWM NAFRNSLLIA LLSATISVSL GATAAMGIVR
SNIRYKSALM LLLVSPMIVP PVVLGLSLYA LFLKLGLVGT YLGLAAAHAI GGIPIVVVIV
AASLQAVDQR LEQGAAVHGA SPLTVFRTVT LPAIAPGLAA AVFFAFLHSF DELVLSLFLS
SPRMKTLPLM LWADINYQLN PVLAVVSTLE VLLVVGGIIL ARPVLTRGKP A
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