Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1201 |
Symbol | |
ID | 5752928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1424866 |
End bp | 1425771 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287470 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001553636 |
Protein GI | 160874320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0492814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAC CGACTAAATT AAAGTGGCTC AAAGGCCGCA TTTGGACCAT AGGCATACCC TATGCTTGGC TGTTATTGTT CTTCGCCTTG CCATTTGCGA TTGTCCTTAA ACTGAGTTTT TCGACGGCGG CGATTGCGAT CCCACCCTAT GAGGCCACGT TCCAATATGC CGATGATGTG TTAAATATCT TCCTGCATTT TGGTAACTAT TTGATGTTGC TCGATGATTC GCTGTATTAC ATGGCGTATC TCAGCTCATT GAAAATGGCG TTAATTTCGA CCATCGGCTG TTTGATTATT GGCTATCCAA TGGCCTATGC CATTGCCCGT GCCCCAGCGC GTTTGCAAAC TGTATTGCTG CTGTTAGTCA TGTTGCCTTC TTGGACCTCA TTTTTAATCC GGGTTTACGC TTGGATGGGG ATCTTAAGTA ACACAGGGAT CATCAACCAT TCGCTGATGT GGCTGGGAAT CATCTCTGAG CCGTTACAAA TCCTCAATAC CAATATTGCC GTGTATATCG GCATCATCTA TGCGTATTTA CCTTTTATGA TTTTGCCCTT GTACGCCACC TTAGTGAAAC TCGATATGAG TTTGATTGAA GCCGCGTCTG ACTTAGGCTC AAGCCGTTTA AATACCTTCT GGAAAATCAC TTTTCCGCTG TCAAAAAGCG GTGTGATTGC CGGTTCTATG TTGGTGTTTA TTCCTGCCGT GGGTGAGTTT GTGATCCCTG AGCTACTCGG TGGTCCAGAT TCCTTAATGA TAGGTCGAGT CTTATGGCAA GAATTCTTCA ATAACCGCGA CTGGCCTGTG GCTTCGTCAC TGGCGATTGT AATGCTGGGC TTATTGATTA TTCCTATTAC CTTATTCCAT CGCTATCAGG CGCGTAGTTT GGAGAAAGAC CTATGA
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Protein sequence | MKIPTKLKWL KGRIWTIGIP YAWLLLFFAL PFAIVLKLSF STAAIAIPPY EATFQYADDV LNIFLHFGNY LMLLDDSLYY MAYLSSLKMA LISTIGCLII GYPMAYAIAR APARLQTVLL LLVMLPSWTS FLIRVYAWMG ILSNTGIINH SLMWLGIISE PLQILNTNIA VYIGIIYAYL PFMILPLYAT LVKLDMSLIE AASDLGSSRL NTFWKITFPL SKSGVIAGSM LVFIPAVGEF VIPELLGGPD SLMIGRVLWQ EFFNNRDWPV ASSLAIVMLG LLIIPITLFH RYQARSLEKD L
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