Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0595 |
Symbol | |
ID | 3960113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 620750 |
End bp | 621991 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637915425 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_521877 |
Protein GI | 89899406 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAAT CGATGACCCT GGACCCCGGC AAACTGGTAG GCCAGTTGCG CCGGGCCGAG CGCCGCAAGC GCGCTTTTGC GATCTCGCTG ACGCTGCCGC TGCTGCTATT TCTGCTGTTC ACCTTCTTGG TGCCAATCGG CGCCTTGTTG GTGCGCGCGG TGGAAAACCC CGAAGTCGCC AATACCTTGG GCCACACGGC CAAGGCCTTG TCAAGCTGGA GCCGCACCGC AGCCCCGCCC GCTGTTGCCT ACGCGGCCTT GATCGAAGAC TTGTCGGCCA TCAAGGAGCA ATCTGACGCC GGTGCGCTGG CGCGTCGGCT CAACAGCGAA GTCAGCGGCG CCCGCTCCCT GATCATGAGC ACCTACCGGG CGCTGCCGCT GGCGCCGGGC ATGACGCCCG AGCAGGTGCG CACCCAGCTG CTGGCGCTCG ATGCGCGCTG GGGCGAGCTC AGTTATTGGC AGGCGATTGC CAAAAATGCG TCGCGCTGGA CGCCTGATTA TTTGTTGACC TCGCTGGACC TGAAGCGTGA TGTGCAGGGC CACATCACGC AGGTGGATGC CGACTCCGCT GCGTTTGCCA ACATCCTGGT TCGCACCTTC AAGATCAGCG CCATCGTCAC CTTGTTTTGC CTGCTGCTGG GGTACCCGCT GGCCTACTGG CTGTCGATCC TGTCGACACG CAAAGCCAAT ATGCTGATGA TTCTGGTGCT GGTGCCGTTC TGGACCTCGA TTCTGGTGCG GGTGGCCGCC TGGATCGTGC TGCTGCAATC CAATGGGCTG GTGAACCGCT CGCTGATGGG CTTGGGGTTG ACCGATGCGC CCTTGCCGCT GCTGTTCAAT CGCCTGGGCG TGATCATCGC CATGGTGCAC ATCCTGCTGC CGTTCATGAT CTTGCCGCTC TACAGTGTGA TGAAGTCGGT GCCACCGACT TACCTGCGGG CGGCAGTGTC GCTGGGCAGC CATCCGCTGG CGGCGTTCTT TCGGGTTTAT GTGCCGCAAA CCTGGCCCGG TGTGGGGGCC GGTGGTTTGC TGGTGTTTAT CCTCAGCATT GGCTATTACG TGACGCCCGC ACTGCTGGGC GGCGCGGGTG ACCAGATGCT GAGTTACTAC ATTGCCCAGT ACACCAATGT CAACGTCAAC TGGGGCATGG CGTGTGCGCT GGGGGCCGTG TTGCTCACGG CCACGCTGGT GCTGTATGCC CTGTACCGCC GTGTCGTCAA GTCCGAACTC AGTCTGGGGT AA
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Protein sequence | MAQSMTLDPG KLVGQLRRAE RRKRAFAISL TLPLLLFLLF TFLVPIGALL VRAVENPEVA NTLGHTAKAL SSWSRTAAPP AVAYAALIED LSAIKEQSDA GALARRLNSE VSGARSLIMS TYRALPLAPG MTPEQVRTQL LALDARWGEL SYWQAIAKNA SRWTPDYLLT SLDLKRDVQG HITQVDADSA AFANILVRTF KISAIVTLFC LLLGYPLAYW LSILSTRKAN MLMILVLVPF WTSILVRVAA WIVLLQSNGL VNRSLMGLGL TDAPLPLLFN RLGVIIAMVH ILLPFMILPL YSVMKSVPPT YLRAAVSLGS HPLAAFFRVY VPQTWPGVGA GGLLVFILSI GYYVTPALLG GAGDQMLSYY IAQYTNVNVN WGMACALGAV LLTATLVLYA LYRRVVKSEL SLG
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