Gene Rfer_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0595 
Symbol 
ID3960113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp620750 
End bp621991 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content63% 
IMG OID637915425 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_521877 
Protein GI89899406 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAAT CGATGACCCT GGACCCCGGC AAACTGGTAG GCCAGTTGCG CCGGGCCGAG 
CGCCGCAAGC GCGCTTTTGC GATCTCGCTG ACGCTGCCGC TGCTGCTATT TCTGCTGTTC
ACCTTCTTGG TGCCAATCGG CGCCTTGTTG GTGCGCGCGG TGGAAAACCC CGAAGTCGCC
AATACCTTGG GCCACACGGC CAAGGCCTTG TCAAGCTGGA GCCGCACCGC AGCCCCGCCC
GCTGTTGCCT ACGCGGCCTT GATCGAAGAC TTGTCGGCCA TCAAGGAGCA ATCTGACGCC
GGTGCGCTGG CGCGTCGGCT CAACAGCGAA GTCAGCGGCG CCCGCTCCCT GATCATGAGC
ACCTACCGGG CGCTGCCGCT GGCGCCGGGC ATGACGCCCG AGCAGGTGCG CACCCAGCTG
CTGGCGCTCG ATGCGCGCTG GGGCGAGCTC AGTTATTGGC AGGCGATTGC CAAAAATGCG
TCGCGCTGGA CGCCTGATTA TTTGTTGACC TCGCTGGACC TGAAGCGTGA TGTGCAGGGC
CACATCACGC AGGTGGATGC CGACTCCGCT GCGTTTGCCA ACATCCTGGT TCGCACCTTC
AAGATCAGCG CCATCGTCAC CTTGTTTTGC CTGCTGCTGG GGTACCCGCT GGCCTACTGG
CTGTCGATCC TGTCGACACG CAAAGCCAAT ATGCTGATGA TTCTGGTGCT GGTGCCGTTC
TGGACCTCGA TTCTGGTGCG GGTGGCCGCC TGGATCGTGC TGCTGCAATC CAATGGGCTG
GTGAACCGCT CGCTGATGGG CTTGGGGTTG ACCGATGCGC CCTTGCCGCT GCTGTTCAAT
CGCCTGGGCG TGATCATCGC CATGGTGCAC ATCCTGCTGC CGTTCATGAT CTTGCCGCTC
TACAGTGTGA TGAAGTCGGT GCCACCGACT TACCTGCGGG CGGCAGTGTC GCTGGGCAGC
CATCCGCTGG CGGCGTTCTT TCGGGTTTAT GTGCCGCAAA CCTGGCCCGG TGTGGGGGCC
GGTGGTTTGC TGGTGTTTAT CCTCAGCATT GGCTATTACG TGACGCCCGC ACTGCTGGGC
GGCGCGGGTG ACCAGATGCT GAGTTACTAC ATTGCCCAGT ACACCAATGT CAACGTCAAC
TGGGGCATGG CGTGTGCGCT GGGGGCCGTG TTGCTCACGG CCACGCTGGT GCTGTATGCC
CTGTACCGCC GTGTCGTCAA GTCCGAACTC AGTCTGGGGT AA
 
Protein sequence
MAQSMTLDPG KLVGQLRRAE RRKRAFAISL TLPLLLFLLF TFLVPIGALL VRAVENPEVA 
NTLGHTAKAL SSWSRTAAPP AVAYAALIED LSAIKEQSDA GALARRLNSE VSGARSLIMS
TYRALPLAPG MTPEQVRTQL LALDARWGEL SYWQAIAKNA SRWTPDYLLT SLDLKRDVQG
HITQVDADSA AFANILVRTF KISAIVTLFC LLLGYPLAYW LSILSTRKAN MLMILVLVPF
WTSILVRVAA WIVLLQSNGL VNRSLMGLGL TDAPLPLLFN RLGVIIAMVH ILLPFMILPL
YSVMKSVPPT YLRAAVSLGS HPLAAFFRVY VPQTWPGVGA GGLLVFILSI GYYVTPALLG
GAGDQMLSYY IAQYTNVNVN WGMACALGAV LLTATLVLYA LYRRVVKSEL SLG